Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1406 |
Symbol | |
ID | 3515364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1702355 |
End bp | 1703950 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637670093 |
Product | hypothetical protein |
Protein accession | YP_264688 |
Protein GI | 71065961 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03504] FimV C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.155703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATA TGCTATATAT CATCGCTGGA TTGGTGGTCA TTTTACTCGT CGCGGTCTTG GTCATGCGCA AAAACAAAGC GCAAAAGCCA TCAGAGCAGT TGAGTACAAA TACTGGCAAA ATCGAGCCCT TATCGAAGCA TACTGCTTCT AAAAGTACGC CCACTCAAAC AGCTATTAAT AATGATAAAA AGTTTGATCA TATTGAGATT GCTCAGCGTT TTATGAACCA ACAGCGCTAT GATAAAGCCA TTGAAACACT CAATCGCGGT CTAAAGAAAA AACCAAATGA CAGCCAGTTA TCTCTCAAGC TACTTGCGGT ATATGCCACG ATAGATGAAT CTGAGAATTT TAATAAAGTC TATGATGCTA TCAAAGCAAA TAATGATGAA AAAAGTATTG CACAAGCTGA TGAGTTAAAA GCTTTGTTGA CTGAAGAACA AAAACCCTTC GCTAAACAAA CTATTCTGGC AGACAATAGC CAAGATGCTG GATTTGAAAG TTTAGCTTTT GATCTACCAG TCAATAAAGC CGAAAGCAAC AGTCCAGTCC TTGATACTGA TGCGACTCAA AATATTGAGC ATAAAAACGA GTTATTAGAG ACTGCTACTG AAACCTTAAC GGCTTTTGAT GATAATAATT TCGATGATAT TGAGCAAGCG TTCGATCTTA GTCTGAGTGA TTTAGAAGAC AGCAGTCATG AACCTGTCCA TACTACTGAT GCTAACTCGG CACCTGTCAC CACGCTTGAC TTAGTAGATG AAAATATTTT TACGCCTGCA ACGATGATTA TAGACACCGA TACTAGTCTT AGTACTGACA GCGATTTTGA TTTTGAGTTG TCGGAGCAGA GTCTTACCAC TACAGAGGCT CCCACCAATG ACGCTACCGA TGATAATTTT GATAACAGCT TAAACGAGCT ATCATTAGAG GATGACTTTT TCTTAGAATT AGACAGTGAT GCCGATACCA ATAACGTTAT CAACAATGCG CCTGTCACCA CAGAGACAAC TTATTTAGAT GATGACCGTC TGACCTTATC TTTAGACAAT GATGACGTGT CAAATGAGAC GCCAAATCAA ACAGAGATTC AGCACTCTAT TGTTGAAGAT AATTTTGAAT ATTTTAGTTT CGAAGACATC AGTATCGAAG ACGCAAATAT TGAAGATGTA AGCGTTGATG AGATAGGTAT TGTAAAAAAT GCGTCTGACG CTTCTAGCAT TGCCCCTACT ACCCTTATGT TCGATGATGA TACGGTAATA GACGATGATT TCGACTTTGA TTTTTTATCA GAGTCTACAA CAGCGAGCAC GCCAGTTGAA ATTGATAGCG AACATACCAT TACTCATATC GATGATGCTA TTGATATAGC TCCTGCAGCT GATACTGGCA GTGCTGAAGA TTTTTCATCA CGGTTCGCAG CAGATTTTGA TTTTGTCAAA TCCTTAGATA GTAATCAAGT AACGCTAGAT TTAGCAGGTC AGTATGTGCA ACTTGGCGAA TACGATAGTG CCAAACGCCT ACTCAATGAA GTCATTGCTA AAGGCAATAG TGAACAGCAG CAGCAAGCAC AACGATTGCT CGATCGCACT GCTTAA
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Protein sequence | MDNMLYIIAG LVVILLVAVL VMRKNKAQKP SEQLSTNTGK IEPLSKHTAS KSTPTQTAIN NDKKFDHIEI AQRFMNQQRY DKAIETLNRG LKKKPNDSQL SLKLLAVYAT IDESENFNKV YDAIKANNDE KSIAQADELK ALLTEEQKPF AKQTILADNS QDAGFESLAF DLPVNKAESN SPVLDTDATQ NIEHKNELLE TATETLTAFD DNNFDDIEQA FDLSLSDLED SSHEPVHTTD ANSAPVTTLD LVDENIFTPA TMIIDTDTSL STDSDFDFEL SEQSLTTTEA PTNDATDDNF DNSLNELSLE DDFFLELDSD ADTNNVINNA PVTTETTYLD DDRLTLSLDN DDVSNETPNQ TEIQHSIVED NFEYFSFEDI SIEDANIEDV SVDEIGIVKN ASDASSIAPT TLMFDDDTVI DDDFDFDFLS ESTTASTPVE IDSEHTITHI DDAIDIAPAA DTGSAEDFSS RFAADFDFVK SLDSNQVTLD LAGQYVQLGE YDSAKRLLNE VIAKGNSEQQ QQAQRLLDRT A
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