Gene Psyc_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1406 
Symbol 
ID3515364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1702355 
End bp1703950 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content39% 
IMG OID637670093 
Producthypothetical protein 
Protein accessionYP_264688 
Protein GI71065961 
COG category 
COG ID 
TIGRFAM ID[TIGR03504] FimV C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.155703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATA TGCTATATAT CATCGCTGGA TTGGTGGTCA TTTTACTCGT CGCGGTCTTG 
GTCATGCGCA AAAACAAAGC GCAAAAGCCA TCAGAGCAGT TGAGTACAAA TACTGGCAAA
ATCGAGCCCT TATCGAAGCA TACTGCTTCT AAAAGTACGC CCACTCAAAC AGCTATTAAT
AATGATAAAA AGTTTGATCA TATTGAGATT GCTCAGCGTT TTATGAACCA ACAGCGCTAT
GATAAAGCCA TTGAAACACT CAATCGCGGT CTAAAGAAAA AACCAAATGA CAGCCAGTTA
TCTCTCAAGC TACTTGCGGT ATATGCCACG ATAGATGAAT CTGAGAATTT TAATAAAGTC
TATGATGCTA TCAAAGCAAA TAATGATGAA AAAAGTATTG CACAAGCTGA TGAGTTAAAA
GCTTTGTTGA CTGAAGAACA AAAACCCTTC GCTAAACAAA CTATTCTGGC AGACAATAGC
CAAGATGCTG GATTTGAAAG TTTAGCTTTT GATCTACCAG TCAATAAAGC CGAAAGCAAC
AGTCCAGTCC TTGATACTGA TGCGACTCAA AATATTGAGC ATAAAAACGA GTTATTAGAG
ACTGCTACTG AAACCTTAAC GGCTTTTGAT GATAATAATT TCGATGATAT TGAGCAAGCG
TTCGATCTTA GTCTGAGTGA TTTAGAAGAC AGCAGTCATG AACCTGTCCA TACTACTGAT
GCTAACTCGG CACCTGTCAC CACGCTTGAC TTAGTAGATG AAAATATTTT TACGCCTGCA
ACGATGATTA TAGACACCGA TACTAGTCTT AGTACTGACA GCGATTTTGA TTTTGAGTTG
TCGGAGCAGA GTCTTACCAC TACAGAGGCT CCCACCAATG ACGCTACCGA TGATAATTTT
GATAACAGCT TAAACGAGCT ATCATTAGAG GATGACTTTT TCTTAGAATT AGACAGTGAT
GCCGATACCA ATAACGTTAT CAACAATGCG CCTGTCACCA CAGAGACAAC TTATTTAGAT
GATGACCGTC TGACCTTATC TTTAGACAAT GATGACGTGT CAAATGAGAC GCCAAATCAA
ACAGAGATTC AGCACTCTAT TGTTGAAGAT AATTTTGAAT ATTTTAGTTT CGAAGACATC
AGTATCGAAG ACGCAAATAT TGAAGATGTA AGCGTTGATG AGATAGGTAT TGTAAAAAAT
GCGTCTGACG CTTCTAGCAT TGCCCCTACT ACCCTTATGT TCGATGATGA TACGGTAATA
GACGATGATT TCGACTTTGA TTTTTTATCA GAGTCTACAA CAGCGAGCAC GCCAGTTGAA
ATTGATAGCG AACATACCAT TACTCATATC GATGATGCTA TTGATATAGC TCCTGCAGCT
GATACTGGCA GTGCTGAAGA TTTTTCATCA CGGTTCGCAG CAGATTTTGA TTTTGTCAAA
TCCTTAGATA GTAATCAAGT AACGCTAGAT TTAGCAGGTC AGTATGTGCA ACTTGGCGAA
TACGATAGTG CCAAACGCCT ACTCAATGAA GTCATTGCTA AAGGCAATAG TGAACAGCAG
CAGCAAGCAC AACGATTGCT CGATCGCACT GCTTAA
 
Protein sequence
MDNMLYIIAG LVVILLVAVL VMRKNKAQKP SEQLSTNTGK IEPLSKHTAS KSTPTQTAIN 
NDKKFDHIEI AQRFMNQQRY DKAIETLNRG LKKKPNDSQL SLKLLAVYAT IDESENFNKV
YDAIKANNDE KSIAQADELK ALLTEEQKPF AKQTILADNS QDAGFESLAF DLPVNKAESN
SPVLDTDATQ NIEHKNELLE TATETLTAFD DNNFDDIEQA FDLSLSDLED SSHEPVHTTD
ANSAPVTTLD LVDENIFTPA TMIIDTDTSL STDSDFDFEL SEQSLTTTEA PTNDATDDNF
DNSLNELSLE DDFFLELDSD ADTNNVINNA PVTTETTYLD DDRLTLSLDN DDVSNETPNQ
TEIQHSIVED NFEYFSFEDI SIEDANIEDV SVDEIGIVKN ASDASSIAPT TLMFDDDTVI
DDDFDFDFLS ESTTASTPVE IDSEHTITHI DDAIDIAPAA DTGSAEDFSS RFAADFDFVK
SLDSNQVTLD LAGQYVQLGE YDSAKRLLNE VIAKGNSEQQ QQAQRLLDRT A