| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1895 |
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| Symbol | |
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| ID | 3716346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2164664 |
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| End bp | 2167315 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_347627 |
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| Protein GI | 77458122 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCAAG TTCGCAAACT GGTGTTAGCA ATAGCGGCCG CCTCGGCGCT GTCCTCCGGT
ATGGCGCATG CCCTCGGGCT CGGGGAGCTG ACCCTGAAGT CGACCCTGAA CCAGCCGCTG
GTGGCGGAAA TCGAGCTGCT CGATGTCAAG GATCTGACCG CTGCCGAAGT GGTGCCGAGC
CTGGCCTCGC CGGAAGATTT CGCCAAGGCT GGCGTCGATC GCCAGGCCTT CCTCAATGAT
CTGACGTTCA CCCCGGTGCT CAACGCCAGC GGCAAAAGTG TGCTGCGCGT CACCTCGAGC
AAACCGCTGT CGGAACCGAT GGTGAAATTT CTCGTGCAGG TGATGTGGCC GAACGGCCGT
CTGCTGCGTG ATTACAGCGT GCTGCTGGAT CCGTCGAAGT TCTCGCCGCA GACCGCTGAT
GCCGCCGCCC AGCCTGCTCC GGCGCAAACC ATCACCGCAC CGACTACCGG CGCCACGCAT
TCGACCCACA CCACCACGCC GCGCGACACC CTGTGGGAAA TCGCCGCCAA GGCGCGCACC
GGCGGTTCGG TGCAGCAGAC CATGCTGGCG ATCCAGGCCT TGAACCCGGA CGCGTTCATC
GGCGGCAACA TCAACCGCCT GAAAACCGGT CAGGTGCTGC GTCTGCCGGA TCAGGTGCAA
AGCACCGCAC TGCCGCAGTC CAAAGCGATT GCCGAAGTGG CGGCGCAGAA CGAAGCCTGG
CGGCAGGGTC GTCGTTATGT GGCCAAGCCG GGCACCGGTC AGCAGCAGCT CGATGCGACC
AATCGTGGTC GCGCCAATAC CGGTGCTGCG CAAAACGCCA AGGACAACCT GAGCCTGGTG
TCAGCCGAAA GCGCCAAGGC GCGTGGCAAG GGTCCGGCCG GCGATGCCAA GGCCCTGAGC
AACAAACTGG CGGTCACTCA GGAAAGTCTC GACACCACCC GTCGTGACAA CGAAGAGCTG
AAAAGCCGCA TGGCCGATCT GCAAAGCCAG CTGGACAAGC TGCAACGCCT GATCGAGCTG
AAGAACAATC AACTGGCGAA AATGCAGGCC GAAGGTTCGG GCTCGGCTCC GGCCACAACG
GCCCCTGTTG TTCCTGCGAT CACTGCGGAA CTGGCAACCA CGCCACCGGC GACTCCTGCA
GAGGTTGCGC CAGTCGCACC TGCGCCTGAG GCCGCTGCTC CGGCCCCGGT CGAGCCGGTT
GTCGAGCCTG TGGTTGAAAC GACGCCGGCC GCCAATGACG AAAAAACCTT CAATGAACTG
CTGACCAATC CAATCCTGTT GGGTCTGGTC GGTGGCGGTG CAGTGGTCCT GCTGCTCCTG
TTGTTGCTGC TGGCCCGTCG CCGCAAGGCG CAACAGGAAG CCGAAAAACA CCTGCGTATG
GCACGTGCGC TGGAGGAGCA GTCCTTCTCC CAGGATCTCG ATCTGCCGGA AAGCAGCTTC
GAAGGTCTGG AGGTGCCAGC CGCCAGCGTC AAGCTGACCC CGGCTCCAGC TCCAGCTCCA
GCTGCGGCGC CTGCCGCCGC TGCTGTAGTT GCGCCCGTCG TGATGGCCGA GCCGATCGCC
GCGCCGCTGG TGGCGCCGGC CGCCGAGCGT TCCGACGACG TGCTGGACAA GGCGCAGTCG
CACATCGACG GCGGTCGTTT GAATCAGGCC GCCGCGTTGC TGGAGGAGGG CGTGAGCCTG
GAGCCGCAGC GCAGCGATCT GCGTCTGAAG CTGATGGAGG TTTACGGTCG CCAGGGTGAT
CGCGATGCCT TCGTCGGTCA GGAGCGTCAA CTGGTTGCCA ATGGCGACAA CTTCGCCAAG
GTCGAAGAGC TGAAAAGCCG CTTCCCGGCC ATGGCGGTCG TCGCGGCCAG CGGTCTTGCG
GCAGCGGCCA TTGCCGCCGA GCTGGACGCG GAATACGTCA AGGAGCTGCT GCTCGACGAG
CCTGAAGCGC CGGCTGCTTC TGCTGCGGCA GATGACGATC TGGACAGCGC TTTCGACCTG
AGCCTCGATG ATCTCGACAA CATCACGCCA GTTGAACCTG TGGCGGCTGT CGAGCCGGAA
ACGCCGGTCG AGCTGGACGC ATTCCCGACT GACGACGACC TGAGCTTCGA GTCGGTGCTG
CAAAAGCAGA CCGACATCAA GGAAAACCTC GACGACCTGT CGGACTTCGA CCTGGATCTG
GATCTCGGTG CCGACCCTGC GCCTGCGCCG GTCGAGTTGG CAGACGATGA CTTCCTGCTG
GATCTGGACG AAGGCGTGAA GGATCTGCCG CTGGTCGAAA CCCCGGCCGT TACCGACGTG
CCGCAGGACG ATCTGGAGCT GCCAGCCGAT TTCGACCTGT CCCTGGCTGA CGAAATGGAC
GCTGCGCCAG CCGAGCCGGA TGCGTTCGCC GCCGAGCTGG ATGACGTCAA CGCTGAGCTG
GATCGTCTGT CGAGCAGCAT CAACGAGCCA AGCTTCACCG AAGCTGATGC TGCGTTGGGT
GATGATCTGG GTGAGGATGA CTTCGACTTC CTGTCCGGCA CCGACGAAGC CGCGACCAAG
CTCGATCTGG CGCAGGCCTA CATCGACATG GGCGACAACG ACGGTGCGCG CGACATCCTC
AATGAAGTCA TCAGCGAGGG GAACGACAAG CAGAAGAGCG AAGCGAGCGA AATGCTTTCG
CATCTGGCCT GA
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| Protein sequence | MVQVRKLVLA IAAASALSSG MAHALGLGEL TLKSTLNQPL VAEIELLDVK DLTAAEVVPS
LASPEDFAKA GVDRQAFLND LTFTPVLNAS GKSVLRVTSS KPLSEPMVKF LVQVMWPNGR
LLRDYSVLLD PSKFSPQTAD AAAQPAPAQT ITAPTTGATH STHTTTPRDT LWEIAAKART
GGSVQQTMLA IQALNPDAFI GGNINRLKTG QVLRLPDQVQ STALPQSKAI AEVAAQNEAW
RQGRRYVAKP GTGQQQLDAT NRGRANTGAA QNAKDNLSLV SAESAKARGK GPAGDAKALS
NKLAVTQESL DTTRRDNEEL KSRMADLQSQ LDKLQRLIEL KNNQLAKMQA EGSGSAPATT
APVVPAITAE LATTPPATPA EVAPVAPAPE AAAPAPVEPV VEPVVETTPA ANDEKTFNEL
LTNPILLGLV GGGAVVLLLL LLLLARRRKA QQEAEKHLRM ARALEEQSFS QDLDLPESSF
EGLEVPAASV KLTPAPAPAP AAAPAAAAVV APVVMAEPIA APLVAPAAER SDDVLDKAQS
HIDGGRLNQA AALLEEGVSL EPQRSDLRLK LMEVYGRQGD RDAFVGQERQ LVANGDNFAK
VEELKSRFPA MAVVAASGLA AAAIAAELDA EYVKELLLDE PEAPAASAAA DDDLDSAFDL
SLDDLDNITP VEPVAAVEPE TPVELDAFPT DDDLSFESVL QKQTDIKENL DDLSDFDLDL
DLGADPAPAP VELADDDFLL DLDEGVKDLP LVETPAVTDV PQDDLELPAD FDLSLADEMD
AAPAEPDAFA AELDDVNAEL DRLSSSINEP SFTEADAALG DDLGEDDFDF LSGTDEAATK
LDLAQAYIDM GDNDGARDIL NEVISEGNDK QKSEASEMLS HLA
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