11 homologs were found in PanDaTox collection
for query gene Pden_2896 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008687  Pden_2896  head-tail adaptor, putative  100 
 
 
116 aa  224  3e-58  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.229996 
 
 
-
 
NC_009952  Dshi_2172  hypothetical protein  47.22 
 
 
112 aa  86.7  1e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1063  hypothetical protein  44.25 
 
 
112 aa  85.5  2e-16  Ruegeria sp. TM1040  Bacteria  normal  normal  0.0767089 
 
 
-
 
NC_009428  Rsph17025_1080  phage head-tail adaptor, putative  50 
 
 
111 aa  84.3  5e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.130936 
 
 
-
 
NC_009049  Rsph17029_1135  phage head-tail adaptor, putative  47.66 
 
 
111 aa  84  6e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.573897 
 
 
-
 
NC_007802  Jann_1637  hypothetical protein  47.01 
 
 
108 aa  83.6  9e-16  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_6053  putative phage tail-head adaptor  46.73 
 
 
111 aa  65.1  0.0000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4970  phage head-tail adaptor  38.83 
 
 
117 aa  53.5  0.0000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.0000866578 
 
 
-
 
NC_004310  BR0591  hypothetical protein  30.84 
 
 
112 aa  49.7  0.00001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0592  hypothetical protein  30.84 
 
 
112 aa  49.7  0.00001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1652  phage head-tail adaptor  33 
 
 
104 aa  40.8  0.006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
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