| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2172 |
|---|
| Symbol | |
|---|
| ID | 5713168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2300318 |
|---|
| End bp | 2300656 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641268094 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001533509 |
|---|
| Protein GI | 159044715 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5614] Bacteriophage head-tail adaptor |
|---|
| TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCG TGCTGAGTCG CAAGCTGATC CTGGAAGAGC GCGTGCAGGT GCCGGACGGG
GCAGGTGGAT TTCAGGAAAG CTGGGAGGCG CGCGGCATGC TTTGGGCGGA CGTGCGTATG
CGCAGTGGCC GGGAAACGAC CCGTCGACCC GCCGTGGCCG TTTCCATGAC GTCGTCGCGC
ATCACCGTAC GTGCCGCGCC CTTCGGCAGT CCGAGCCGAC CCAAGCCGGA TCAGCGATTT
CGAGAGGGCA ATCGGACCTT TCGGATCCTC GCGGTCGGAG AGGCGGATCA CGATGCCCGT
TTCCTGACCT GCTTTGTCGA TGAGGAGGTT CCGGGATGA
|
|---|
| Protein sequence | MTPVLSRKLI LEERVQVPDG AGGFQESWEA RGMLWADVRM RSGRETTRRP AVAVSMTSSR
ITVRAAPFGS PSRPKPDQRF REGNRTFRIL AVGEADHDAR FLTCFVDEEV PG
|
|---|
| |