More than 300 homologs were found in PanDaTox collection
for query gene Pden_1884 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_1884  imidazole glycerol phosphate synthase subunit HisH  100 
 
 
209 aa  424  1e-118  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0795  imidazole glycerol phosphate synthase subunit HisH  69.81 
 
 
212 aa  301  5.000000000000001e-81  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.035828  normal  0.798127 
 
 
-
 
NC_008044  TM1040_2034  imidazole glycerol phosphate synthase subunit HisH  64.62 
 
 
212 aa  278  3e-74  Ruegeria sp. TM1040  Bacteria  normal  normal  0.848915 
 
 
-
 
NC_007493  RSP_2245  imidazole glycerol phosphate synthase subunit HisH  64.62 
 
 
212 aa  275  4e-73  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0920  imidazole glycerol phosphate synthase subunit HisH  64.62 
 
 
212 aa  275  5e-73  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0325884  normal  0.0549434 
 
 
-
 
NC_009428  Rsph17025_2250  imidazole glycerol phosphate synthase subunit HisH  64.62 
 
 
212 aa  273  2.0000000000000002e-72  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.368606  normal  0.493725 
 
 
-
 
NC_007802  Jann_2789  imidazole glycerol phosphate synthase subunit HisH  62.26 
 
 
212 aa  268  2.9999999999999997e-71  Jannaschia sp. CCS1  Bacteria  normal  0.132708  normal  0.958609 
 
 
-
 
NC_011666  Msil_2552  imidazole glycerol phosphate synthase, glutamine amidotransferase subunit  60.83 
 
 
216 aa  260  8.999999999999999e-69  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_7531  imidazole glycerol phosphate synthase subunit HisH  62.33 
 
 
220 aa  260  8.999999999999999e-69  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0247  imidazole glycerol phosphate synthase, glutamine amidotransferase subunit  61.21 
 
 
226 aa  256  2e-67  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371354  normal 
 
 
-
 
NC_010511  M446_6792  imidazole glycerol phosphate synthase subunit HisH  60.47 
 
 
220 aa  255  3e-67  Methylobacterium sp. 4-46  Bacteria  normal  0.321621  normal 
 
 
-
 
NC_009720  Xaut_2291  imidazole glycerol phosphate synthase subunit HisH  60 
 
 
215 aa  254  6e-67  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.584947 
 
 
-
 
NC_009719  Plav_1235  imidazole glycerol phosphate synthase, glutamine amidotransferase subunit  60.19 
 
 
216 aa  253  2.0000000000000002e-66  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.745133 
 
 
-
 
NC_007964  Nham_0124  imidazole glycerol phosphate synthase subunit HisH  57.87 
 
 
216 aa  251  5.000000000000001e-66  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3596  imidazole glycerol phosphate synthase subunit HisH  60.75 
 
 
214 aa  250  1e-65  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0469  imidazole glycerol phosphate synthase subunit HisH  59.81 
 
 
219 aa  250  1e-65  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0035  imidazole glycerol phosphate synthase subunit HisH  57.87 
 
 
216 aa  249  2e-65  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0836  imidazole glycerol phosphate synthase subunit HisH  57.41 
 
 
216 aa  249  2e-65  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2550  imidazole glycerol phosphate synthase subunit HisH  58.6 
 
 
220 aa  247  9e-65  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_2003  imidazole glycerol phosphate synthase subunit HisH  57.41 
 
 
216 aa  246  2e-64  Brucella ovis ATCC 25840  Bacteria  normal  0.486883  n/a   
 
 
-
 
NC_011757  Mchl_2773  imidazole glycerol phosphate synthase subunit HisH  58.14 
 
 
220 aa  245  3e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.162209  normal  0.967769 
 
 
-
 
NC_010725  Mpop_2480  imidazole glycerol phosphate synthase subunit HisH  57.67 
 
 
220 aa  245  4e-64  Methylobacterium populi BJ001  Bacteria  normal  decreased coverage  0.00537533 
 
 
-
 
NC_007406  Nwi_0124  imidazole glycerol phosphate synthase subunit HisH  57.41 
 
 
216 aa  244  4.9999999999999997e-64  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.304461 
 
 
-
 
NC_004310  BR2083  imidazole glycerol phosphate synthase subunit HisH  56.94 
 
 
216 aa  244  6.999999999999999e-64  Brucella suis 1330  Bacteria  normal  0.93001  n/a   
 
 
-
 
NC_007925  RPC_0306  imidazole glycerol phosphate synthase subunit HisH  56.94 
 
 
216 aa  243  1.9999999999999999e-63  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0407  imidazole glycerol phosphate synthase subunit HisH  57.41 
 
 
216 aa  242  3e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.708101  normal  0.593429 
 
 
-
 
NC_008254  Meso_3495  imidazole glycerol phosphate synthase subunit HisH  56.02 
 
 
216 aa  241  6e-63  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2718  imidazole glycerol phosphate synthase subunit HisH  58.65 
 
 
208 aa  239  1e-62  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0146  imidazole glycerol phosphate synthase subunit HisH  55.76 
 
 
216 aa  239  2e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0413  imidazole glycerol phosphate synthase subunit HisH  56.48 
 
 
216 aa  238  4e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0313  imidazole glycerol phosphate synthase subunit HisH  55.56 
 
 
216 aa  237  1e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3979  imidazole glycerol phosphate synthase subunit HisH  56.48 
 
 
216 aa  236  3e-61  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4306  imidazole glycerol phosphate synthase subunit HisH  55.09 
 
 
216 aa  230  1e-59  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_3261  imidazole glycerol phosphate synthase subunit HisH  54.63 
 
 
216 aa  229  3e-59  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_5044  imidazole glycerol phosphate synthase subunit HisH  54.03 
 
 
213 aa  225  3e-58  Caulobacter sp. K31  Bacteria  normal  normal  0.221108 
 
 
-
 
NC_009484  Acry_1414  imidazole glycerol phosphate synthase subunit HisH  52.83 
 
 
211 aa  211  7e-54  Acidiphilium cryptum JF-5  Bacteria  normal  0.70982  n/a   
 
 
-
 
NC_008048  Sala_3148  imidazole glycerol phosphate synthase subunit HisH  53.37 
 
 
202 aa  209  3e-53  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1007  imidazole glycerol phosphate synthase subunit HisH  52.86 
 
 
209 aa  205  5e-52  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1621  imidazole glycerol phosphate synthase subunit HisH  51.43 
 
 
223 aa  201  7e-51  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.80833  normal 
 
 
-
 
NC_008148  Rxyl_1104  imidazole glycerol phosphate synthase subunit hisH  49.76 
 
 
205 aa  178  4e-44  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.534575  n/a   
 
 
-
 
NC_011662  Tmz1t_0907  imidazole glycerol phosphate synthase subunit HisH  46.51 
 
 
212 aa  172  2.9999999999999996e-42  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0834  imidazole glycerol phosphate synthase subunit HisH  46.33 
 
 
218 aa  171  9e-42  Methylibium petroleiphilum PM1  Bacteria  normal  0.461825  normal 
 
 
-
 
NC_011992  Dtpsy_0731  imidazole glycerol phosphate synthase subunit HisH  45.21 
 
 
222 aa  171  1e-41  Acidovorax ebreus TPSY  Bacteria  normal  0.154822  n/a   
 
 
-
 
NC_008782  Ajs_0764  imidazole glycerol phosphate synthase subunit HisH  45.21 
 
 
222 aa  171  1e-41  Acidovorax sp. JS42  Bacteria  normal  decreased coverage  0.0089517 
 
 
-
 
NC_008576  Mmc1_2939  imidazole glycerol phosphate synthase subunit hisH  44.5 
 
 
211 aa  170  2e-41  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009707  JJD26997_0399  imidazole glycerol phosphate synthase subunit HisH  40.49 
 
 
205 aa  169  3e-41  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.489329  n/a   
 
 
-
 
NC_010551  BamMC406_0356  imidazole glycerol phosphate synthase subunit HisH  44.19 
 
 
213 aa  168  5e-41  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.461227 
 
 
-
 
NC_008390  Bamb_0347  imidazole glycerol phosphate synthase subunit HisH  44.19 
 
 
213 aa  168  5e-41  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1169  imidazole glycerol phosphate synthase, glutamine amidotransferase subunit  44.65 
 
 
218 aa  168  5e-41  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3527  imidazole glycerol phosphate synthase subunit HisH  44.19 
 
 
213 aa  167  7e-41  Burkholderia sp. 383  Bacteria  normal  0.62758  normal  0.281041 
 
 
-
 
NC_007347  Reut_A3107  imidazole glycerol phosphate synthase subunit HisH  44.29 
 
 
217 aa  167  8e-41  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1510  imidazole glycerol phosphate synthase subunit HisH  40.98 
 
 
201 aa  167  9e-41  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2352  imidazole glycerol phosphate synthase subunit HisH  43.07 
 
 
203 aa  167  1e-40  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0200557  n/a   
 
 
-
 
NC_008787  CJJ81176_1332  imidazole glycerol phosphate synthase subunit HisH  40.98 
 
 
201 aa  167  1e-40  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1004  imidazole glycerol phosphate synthase subunit HisH  42.36 
 
 
203 aa  167  1e-40  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0408  imidazole glycerol phosphate synthase subunit HisH  44.19 
 
 
213 aa  167  1e-40  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.186972 
 
 
-
 
NC_008060  Bcen_2678  imidazole glycerol phosphate synthase subunit HisH  44.19 
 
 
213 aa  167  1e-40  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0429  imidazole glycerol phosphate synthase subunit HisH  44.19 
 
 
213 aa  167  1e-40  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2755  imidazole glycerol phosphate synthase subunit HisH  44.65 
 
 
213 aa  166  2e-40  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3797  imidazole glycerol phosphate synthase subunit HisH  42.92 
 
 
207 aa  165  5e-40  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_0807  imidazole glycerol phosphate synthase subunit HisH  45.33 
 
 
223 aa  165  5e-40  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_3244  imidazole glycerol phosphate synthase subunit HisH  42.99 
 
 
217 aa  164  5.9999999999999996e-40  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2391  imidazole glycerol phosphate synthase, glutamine amidotransferase subunit  43.52 
 
 
212 aa  164  6.9999999999999995e-40  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.507016  normal 
 
 
-
 
NC_007969  Pcryo_2442  imidazole glycerol phosphate synthase subunit HisH  42.99 
 
 
214 aa  164  6.9999999999999995e-40  Psychrobacter cryohalolentis K5  Bacteria  normal  0.687741  normal 
 
 
-
 
NC_013501  Rmar_1571  imidazole glycerol phosphate synthase, glutamine amidotransferase subunit  45.45 
 
 
208 aa  164  6.9999999999999995e-40  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0699  imidazole glycerol phosphate synthase subunit HisH  43.95 
 
 
251 aa  164  1.0000000000000001e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.349762 
 
 
-
 
NC_013216  Dtox_0755  imidazole glycerol phosphate synthase subunit HisH  43.63 
 
 
204 aa  163  2.0000000000000002e-39  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3702  imidazole glycerol phosphate synthase subunit HisH  42.92 
 
 
207 aa  162  4.0000000000000004e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2686  imidazole glycerol phosphate synthase subunit HisH  43.81 
 
 
206 aa  162  4.0000000000000004e-39  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_2120  imidazole glycerol phosphate synthase subunit HisH  42.52 
 
 
214 aa  161  6e-39  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0332  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  161  6e-39  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.185199  normal 
 
 
-
 
NC_010682  Rpic_3225  imidazole glycerol phosphate synthase subunit HisH  42.34 
 
 
217 aa  161  6e-39  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2948  imidazole glycerol phosphate synthase subunit HisH  42.08 
 
 
217 aa  160  1e-38  Ralstonia solanacearum GMI1000  Bacteria  normal  0.362272  normal 
 
 
-
 
NC_012856  Rpic12D_2878  imidazole glycerol phosphate synthase subunit HisH  42.34 
 
 
217 aa  160  1e-38  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0311205 
 
 
-
 
NC_008836  BMA10229_A1792  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  160  2e-38  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2710  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  160  2e-38  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3662  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  159  2e-38  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3689  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  160  2e-38  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3720  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  160  2e-38  Burkholderia pseudomallei 1106a  Bacteria  normal  0.353625  n/a   
 
 
-
 
NC_009675  Anae109_0755  imidazole glycerol phosphate synthase subunit HisH  44.33 
 
 
204 aa  159  2e-38  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3556  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  159  2e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  0.216962  hitchhiker  0.0000453682 
 
 
-
 
NC_009080  BMA10247_2761  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  160  2e-38  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4055  imidazole glycerol phosphate synthase subunit HisH  43.27 
 
 
208 aa  159  2e-38  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3243  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  160  2e-38  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0402  imidazole glycerol phosphate synthase subunit HisH  43.72 
 
 
213 aa  159  3e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0061  imidazole glycerol phosphate synthase subunit HisH  40.93 
 
 
211 aa  159  3e-38  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5519  imidazole glycerol phosphate synthase, glutamine amidotransferase subunit  42.92 
 
 
220 aa  158  6e-38  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009635  Maeo_0185  imidazole glycerol phosphate synthase subunit HisH  40 
 
 
205 aa  158  7e-38  Methanococcus aeolicus Nankai-3  Archaea  normal  0.391944  n/a   
 
 
-
 
NC_002939  GSU3097  imidazole glycerol phosphate synthase subunit HisH  44.5 
 
 
209 aa  157  9e-38  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0697  imidazole glycerol phosphate synthase subunit HisH  39.61 
 
 
203 aa  157  1e-37  Methanococcus maripaludis C6  Archaea  normal  0.51221  n/a   
 
 
-
 
NC_007651  BTH_I2989  imidazole glycerol phosphate synthase subunit HisH  43.26 
 
 
213 aa  157  1e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1590  imidazole glycerol phosphate synthase subunit HisH  42.79 
 
 
215 aa  157  1e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00301608 
 
 
-
 
NC_008609  Ppro_3057  imidazole glycerol phosphate synthase subunit HisH  43.75 
 
 
207 aa  157  2e-37  Pelobacter propionicus DSM 2379  Bacteria  normal  0.702025  n/a   
 
 
-
 
NC_009943  Dole_0782  imidazole glycerol phosphate synthase subunit HisH  41.12 
 
 
209 aa  155  3e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1329  imidazole glycerol phosphate synthase subunit HisH  39.32 
 
 
202 aa  155  4e-37  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0386  imidazole glycerol phosphate synthase subunit HisH  40.98 
 
 
204 aa  155  4e-37  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1710  imidazole glycerol phosphate synthase subunit hisH  43.78 
 
 
228 aa  155  5.0000000000000005e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2804  amidotransferase HisH  45.83 
 
 
217 aa  154  6e-37  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1624  imidazole glycerol phosphate synthase subunit HisH  44.61 
 
 
205 aa  155  6e-37  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2886  imidazole glycerol phosphate synthase subunit HisH  41.18 
 
 
204 aa  154  6e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
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