Gene Sala_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3148 
SymbolhisH 
ID4082484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3299163 
End bp3299771 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content68% 
IMG OID638011533 
Productimidazole glycerol phosphate synthase subunit HisH 
Protein accessionYP_618184 
Protein GI103488623 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA TTGCCCTGAT CGACTATGGC GCGGGCAATC TTCGCTCGGT GCATAATGCG 
CTCGTCGCGG CGGGCGCGGA CACTGTCGCC GTCACCGCCG ACCCCGATGC CGTGGCCCGG
GCCGACCGCA TCGTGCTGCC CGGCGTCGGC GCGTTCGCGG CGTGCATGAA CGGGCTGTCG
GCGATCGACG GGCTGATCGA AGCGATGGTG CGCCGGGTGC GCGGCGAAGG TGCGCCCTTC
CTCGGCATCT GCGTCGGGAT GCAATTGCTC GCCGATTCGG GCGAAGAGCA TGGTCGGCAT
CCCGGCCTCG GCTGGATCGG CGGCACGGTG CGCGCGTTCG ACCCGCAACC GGGCCTCTGC
ATCCCGCACA TGGGCTGGAA CGATGTCGTC CCGACGTTCG CGCACCCGGT GATCGCGGTG
GGCGAAGCCT ATTATCTCCA CGGCTATCAT TTCGCGGACG CGGCGCATGT CGCCGCGACG
AGCAGTCACG GCGGTCCCTT CACCGCCGCC GTGGCGAAGG ACAATGTCGT GGGTGTCCAG
TTTCATCCCG AAAAAAGCCA GGCCTATGGC CTCGCGACGC TCGAAAGGTT CCTCGCTTGG
CGGCCCTGA
 
Protein sequence
MSVIALIDYG AGNLRSVHNA LVAAGADTVA VTADPDAVAR ADRIVLPGVG AFAACMNGLS 
AIDGLIEAMV RRVRGEGAPF LGICVGMQLL ADSGEEHGRH PGLGWIGGTV RAFDPQPGLC
IPHMGWNDVV PTFAHPVIAV GEAYYLHGYH FADAAHVAAT SSHGGPFTAA VAKDNVVGVQ
FHPEKSQAYG LATLERFLAW RP