Gene RPB_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0407 
SymbolhisH 
ID3908845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp451218 
End bp451868 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID637882293 
Productimidazole glycerol phosphate synthase subunit HisH 
Protein accessionYP_484029 
Protein GI86747533 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.708101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.593429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGG CCATCGTCGA TTACGGCTCG GGCAATCTGC ACTCGGCCGC GAAGGCGTTC 
GAGCGTGCGG CGCGGAGCAT GGAAGTCCCC GAAAAGATCA TCGTCACCCG CGATCCGGAG
CAGGTGTTTC GCTCCGATCG CGTGGTGCTG CCGGGCGTCG GCGCTTTCGC CGATTGCCGC
AAGGGGCTCG ACGCGATCGA CGGCATGGTC GAGGCGTTGA ACGAGACGGT GCGGGTCAAG
GCGCGGCCGT TCTTCGGCAT CTGCGTCGGC ATGCAGCTGA TGGCGACCCG CGGCAAGGAG
CACGTCACCA CCGACGGGCT CGGCTGGATT CCCGGCGACG TCGTCAGGAT CGCGCCGAAC
CAGGAGGATC TGAAGATCCC GCATATGGGC TGGAACACGC TCGACGTGTT GCGCGAGCAC
CCGGTGCTGG AGCGGCTGCC GCTCGGGCCG AAGGGCTTGC ATGCGTACTT CGTGCATTCG
TTTCATCTGG CCGCTACCAG CGAAGCCGAC GTGCTGGCCC GCGCCGACTA CGGCGGCCCG
GTCACCGCGG TGGTGGGCCG CGACACCATG CTGGGAACCC AGTTTCACCC CGAGAAAAGC
CAGCGTTTCG GGCTGGCGCT GATCTCGAAT TTTCTGAAGT GGAAGCCGTG A
 
Protein sequence
MSVAIVDYGS GNLHSAAKAF ERAARSMEVP EKIIVTRDPE QVFRSDRVVL PGVGAFADCR 
KGLDAIDGMV EALNETVRVK ARPFFGICVG MQLMATRGKE HVTTDGLGWI PGDVVRIAPN
QEDLKIPHMG WNTLDVLREH PVLERLPLGP KGLHAYFVHS FHLAATSEAD VLARADYGGP
VTAVVGRDTM LGTQFHPEKS QRFGLALISN FLKWKP