Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0407 |
Symbol | hisH |
ID | 3908845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 451218 |
End bp | 451868 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882293 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_484029 |
Protein GI | 86747533 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.708101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.593429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGG CCATCGTCGA TTACGGCTCG GGCAATCTGC ACTCGGCCGC GAAGGCGTTC GAGCGTGCGG CGCGGAGCAT GGAAGTCCCC GAAAAGATCA TCGTCACCCG CGATCCGGAG CAGGTGTTTC GCTCCGATCG CGTGGTGCTG CCGGGCGTCG GCGCTTTCGC CGATTGCCGC AAGGGGCTCG ACGCGATCGA CGGCATGGTC GAGGCGTTGA ACGAGACGGT GCGGGTCAAG GCGCGGCCGT TCTTCGGCAT CTGCGTCGGC ATGCAGCTGA TGGCGACCCG CGGCAAGGAG CACGTCACCA CCGACGGGCT CGGCTGGATT CCCGGCGACG TCGTCAGGAT CGCGCCGAAC CAGGAGGATC TGAAGATCCC GCATATGGGC TGGAACACGC TCGACGTGTT GCGCGAGCAC CCGGTGCTGG AGCGGCTGCC GCTCGGGCCG AAGGGCTTGC ATGCGTACTT CGTGCATTCG TTTCATCTGG CCGCTACCAG CGAAGCCGAC GTGCTGGCCC GCGCCGACTA CGGCGGCCCG GTCACCGCGG TGGTGGGCCG CGACACCATG CTGGGAACCC AGTTTCACCC CGAGAAAAGC CAGCGTTTCG GGCTGGCGCT GATCTCGAAT TTTCTGAAGT GGAAGCCGTG A
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Protein sequence | MSVAIVDYGS GNLHSAAKAF ERAARSMEVP EKIIVTRDPE QVFRSDRVVL PGVGAFADCR KGLDAIDGMV EALNETVRVK ARPFFGICVG MQLMATRGKE HVTTDGLGWI PGDVVRIAPN QEDLKIPHMG WNTLDVLREH PVLERLPLGP KGLHAYFVHS FHLAATSEAD VLARADYGGP VTAVVGRDTM LGTQFHPEKS QRFGLALISN FLKWKP
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