| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1590 |
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| Symbol | hisH |
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| ID | 6162997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1688399 |
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| End bp | 1689046 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664344 |
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| Product | imidazole glycerol phosphate synthase subunit HisH |
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| Protein accession | YP_001790622 |
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| Protein GI | 171058273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0118] Glutamine amidotransferase |
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| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00301608 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCGAA CCGTCGCTGT CGTCGATTAC GGCATGGGCA ACCTGCGTTC GGTGTCGCAG
GCGGTGGCGC ATGTGGCGCG CGACCTCGAC ATCAAGGTCA TCGTCACCGC CAACCCGGAG
GAAGTGCTCG CCGCCGAACG CGTGGTGCTG CCCGGCCAGG GTGCGATGCG CGACTGCATG
CGCGAGCTGA CCGAATCCGG CCTGAAAGAG GCCGTGCTCG AGGTGGCGCG CGACAAGCCG
CTGATGGGTG TGTGCGTGGG CATGCAGATG CTGCTCGACC ACAGCGACGA GCAGGACACG
CCCGCGCTCG GGCTGATCCC GGGGCGCGTC AGGCGTTTTC AGCTCGAAGG CCGGATCCAG
CCCGACGGCA GCCGCTACAA GGTGCCGCAG ATGGGCTGGA ACCGCGTGCA CCAGAGCCGC
GCCCATCCGG TGTGGGCGGG CGTGCCCGAT CAGTCGTGGT TCTACTTCGT GCACAGCTAC
TTCGCGCAAC CGGAATTGAG CGAACACAGC GCCGGTGAAA CGGACTACGG CGATCGCTTT
ACCTGTGTGG TGGCGCGGGA TAATATTTTT GCGACCCAGT TCCATCCTGA GAAGAGTGCC
GATCAGGGCT TGGCCCTGTA CCGCAACTTC CTGAGCTGGA AGCCCTGA
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| Protein sequence | MTRTVAVVDY GMGNLRSVSQ AVAHVARDLD IKVIVTANPE EVLAAERVVL PGQGAMRDCM
RELTESGLKE AVLEVARDKP LMGVCVGMQM LLDHSDEQDT PALGLIPGRV RRFQLEGRIQ
PDGSRYKVPQ MGWNRVHQSR AHPVWAGVPD QSWFYFVHSY FAQPELSEHS AGETDYGDRF
TCVVARDNIF ATQFHPEKSA DQGLALYRNF LSWKP
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