Gene BBta_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0146 
SymbolhisH 
ID5149958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp151975 
End bp152625 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID640555171 
Productimidazole glycerol phosphate synthase subunit HisH 
Protein accessionYP_001236349 
Protein GI148251764 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTG CCATCATCGA TTACGGCTCC GGCAATCTGC ATTCCGCCGC GAAAGCGTTC 
GAGCGCGCCG CGCGCAGCAT GGAGGATCCG CAGAAGGTCG TGGTGACCCG CGATCCCGAC
ACGGTGTATC GCGCCGACCG CATCGTGCTG CCGGGCGTCG GCGCCTTCGC CGATTGCCGC
CGTGGGCTCG ATGCCGTCGA CGGCATGCTG GAGGCGATGA CCGAGGCCGT CCGCCAAAAG
GCGCGGCCGT TCTTCGGCAT CTGCGTCGGC ATGCAGTTGA TGGCGACGCG GGGCAAGGAG
CATGTCACCA CCGACGGCTT CGACTGGGTC GCTGGCGATG TCGAGAAGAT CGCGCCCCGC
GACGAGAGCC TGAAGATCCC GCATATGGGC TGGAACACGC TCGACTTGGT GCAGGAGCAT
CCGGTGCTGG AGCGGCTGCC GCTCGGGCCG AAGGGCCTGC ACGCCTACTT CGTGCACTCC
TATCACTTGA ACGCCGTCAA TGAGAACGAC GTGCTGGCGC GCGCCGATTA TGGCGGGCCG
ATCACCGCGA TCGTCGGCAA GGACACCGCG ATCGGCACGC AATTCCATCC CGAGAAGAGC
CAGCGTTTCG GTCTCGCCCT CATTTCCAAC TTCCTGAAGT GGAAGCCGTG A
 
Protein sequence
MSVAIIDYGS GNLHSAAKAF ERAARSMEDP QKVVVTRDPD TVYRADRIVL PGVGAFADCR 
RGLDAVDGML EAMTEAVRQK ARPFFGICVG MQLMATRGKE HVTTDGFDWV AGDVEKIAPR
DESLKIPHMG WNTLDLVQEH PVLERLPLGP KGLHAYFVHS YHLNAVNEND VLARADYGGP
ITAIVGKDTA IGTQFHPEKS QRFGLALISN FLKWKP