Gene Pden_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1884 
SymbolhisH 
ID4580543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1886482 
End bp1887111 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content69% 
IMG OID639769204 
Productimidazole glycerol phosphate synthase subunit HisH 
Protein accessionYP_915675 
Protein GI119384619 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTGG CCCTGGTCGA TTACGACAGC GGCAACCTGC ATTCGGCTGA AAAGGCCTTT 
GCGCTGATGG GGCGCGAGGC GGGGGCCGAA GTGGTGGTGA CCTCGGACCC CGATGCGGTC
GCGCGCGCCG ACCGCATCGT GCTGCCGGGC GATGGCGCCT TTCCGGCCTG CCGCGCGGCA
CTGGATGCCG TGCCCGGCAT GGTCGAGGCG CTGCGCGAGG CGGTGCTGGA CCGCGCCGTG
CCCTTCATGG GCATCTGCGT CGGCATGCAG ATGCTGGCCG AGACCGGGCA CGAATATCGC
GACACCCAGG GGCTGGGCTG GATCGGCGGC GAGATCGACG CCATCGACGC CCCCGGCCTG
AAGGTGCCGC ATATGGGCTG GAACGACCTG ACGGTGCTGC GCCCGCATCC GCTGCTGGAC
GGCATCGCGA CCGGCGATCA CGCCTATTTC GTGCATAGCT GGCAGTTCCG CGTCGCCAAT
CCGGCGCATC TGCTGGCCAC TGTCGATTAC GGCGGGCCGG TGACGGCGGT GGTCGGGCGC
GACAATATCG TCGGCACCCA GTTCCATCCC GAGAAGTCGC AGGCCGTCGG CCTGCACATC
ATCGGCAACT TCCTGCGCTG GCGCCCGTGA
 
Protein sequence
MRVALVDYDS GNLHSAEKAF ALMGREAGAE VVVTSDPDAV ARADRIVLPG DGAFPACRAA 
LDAVPGMVEA LREAVLDRAV PFMGICVGMQ MLAETGHEYR DTQGLGWIGG EIDAIDAPGL
KVPHMGWNDL TVLRPHPLLD GIATGDHAYF VHSWQFRVAN PAHLLATVDY GGPVTAVVGR
DNIVGTQFHP EKSQAVGLHI IGNFLRWRP