Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1884 |
Symbol | hisH |
ID | 4580543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1886482 |
End bp | 1887111 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639769204 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_915675 |
Protein GI | 119384619 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTGG CCCTGGTCGA TTACGACAGC GGCAACCTGC ATTCGGCTGA AAAGGCCTTT GCGCTGATGG GGCGCGAGGC GGGGGCCGAA GTGGTGGTGA CCTCGGACCC CGATGCGGTC GCGCGCGCCG ACCGCATCGT GCTGCCGGGC GATGGCGCCT TTCCGGCCTG CCGCGCGGCA CTGGATGCCG TGCCCGGCAT GGTCGAGGCG CTGCGCGAGG CGGTGCTGGA CCGCGCCGTG CCCTTCATGG GCATCTGCGT CGGCATGCAG ATGCTGGCCG AGACCGGGCA CGAATATCGC GACACCCAGG GGCTGGGCTG GATCGGCGGC GAGATCGACG CCATCGACGC CCCCGGCCTG AAGGTGCCGC ATATGGGCTG GAACGACCTG ACGGTGCTGC GCCCGCATCC GCTGCTGGAC GGCATCGCGA CCGGCGATCA CGCCTATTTC GTGCATAGCT GGCAGTTCCG CGTCGCCAAT CCGGCGCATC TGCTGGCCAC TGTCGATTAC GGCGGGCCGG TGACGGCGGT GGTCGGGCGC GACAATATCG TCGGCACCCA GTTCCATCCC GAGAAGTCGC AGGCCGTCGG CCTGCACATC ATCGGCAACT TCCTGCGCTG GCGCCCGTGA
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Protein sequence | MRVALVDYDS GNLHSAEKAF ALMGREAGAE VVVTSDPDAV ARADRIVLPG DGAFPACRAA LDAVPGMVEA LREAVLDRAV PFMGICVGMQ MLAETGHEYR DTQGLGWIGG EIDAIDAPGL KVPHMGWNDL TVLRPHPLLD GIATGDHAYF VHSWQFRVAN PAHLLATVDY GGPVTAVVGR DNIVGTQFHP EKSQAVGLHI IGNFLRWRP
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