| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0306 |
|---|
| Symbol | hisH |
|---|
| ID | 3971026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 327775 |
|---|
| End bp | 328425 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637923420 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisH |
|---|
| Protein accession | YP_530200 |
|---|
| Protein GI | 90421830 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCG CCATCATCGA TTACGGCTCC GGCAATCTGC ACTCCGCCGC CAAGGCGTTC
GAGCGCGCCG CGCGCGGCAT GGACGTGCCG GACAAGATCG TGGTGACCAG CGATCCGGAA
GTGGTGTACC GCGCCGACCG CGTGGTGCTG CCCGGCGTCG GCGCGTTCGC CGATTGCCGC
CGCGGGCTCG ACGCGGTCGA CGGTATGGTG CAGGCGATGA CCGAAGCGGT GCGCGACAAG
GCGCGGCCGT TCTTCGGCAT CTGCGTCGGC ATGCAGCTGA TGGCGACCCA CGGCAAGGAG
CACGTCACCT CGGACGGGCT CGGCTGGATC CCCGGCGACG TGGTCAAGAT CACGCCGCGC
GAGGAGAATT TGAAGATCCC GCATATGGGC TGGAATACGC TGGAGATGCT GCGCGAGCAT
CCGGTGCTGG AGCGGTTGCC GCTCGGCCCG AACGGCCGCC ACGCCTATTT CGTGCATTCC
TTCCACCTCG CCGCCGTCAA CGAATCCGAC GTGCTGGCGC GCGCCGAATA TGGCGGGCCG
GTCACCGCGA TCGTCGGCCG CGACACCATG TTCGGCACCC AGTTTCACCC CGAGAAGAGC
CAGCGCTTCG GGCTGGCGCT GATCTCGAAT TTCTTGAAGT GGAAGCCGTG A
|
|---|
| Protein sequence | MSVAIIDYGS GNLHSAAKAF ERAARGMDVP DKIVVTSDPE VVYRADRVVL PGVGAFADCR
RGLDAVDGMV QAMTEAVRDK ARPFFGICVG MQLMATHGKE HVTSDGLGWI PGDVVKITPR
EENLKIPHMG WNTLEMLREH PVLERLPLGP NGRHAYFVHS FHLAAVNESD VLARAEYGGP
VTAIVGRDTM FGTQFHPEKS QRFGLALISN FLKWKP
|
|---|
| |