17 homologs were found in PanDaTox collection
for query gene PA14_59320 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_59320  type IV B pilus protein  100 
 
 
176 aa  345  2e-94  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00129697  hitchhiker  0.00000000000539359 
 
 
-
 
NC_009656  PSPA7_4476  type IV B pilus protein  97.73 
 
 
176 aa  312  1.9999999999999998e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1512  prepilin  50.29 
 
 
174 aa  172  1.9999999999999998e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009705  YpsIP31758_B0019  type IV prepilin domain-containing protein PilS  34.29 
 
 
175 aa  94.4  8e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009704  YpsIP31758_A0065  putative type IV secretion system protein PilS2  34.71 
 
 
168 aa  76.6  0.0000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011081  SeHA_A0112  typeIV prepilin  34.97 
 
 
204 aa  67.4  0.00000000009  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3729  type IV pilus biogenesis protein  30.87 
 
 
195 aa  57.8  0.00000009  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2252  putative type IV pilus protein  28.07 
 
 
196 aa  52  0.000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2168  putative type IV pilus protein  28.07 
 
 
196 aa  51.6  0.000005  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.00445151  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0651  putative major pilin subunit  28.07 
 
 
184 aa  51.6  0.000005  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1605  putative type IV pilus biogenesis protein  28.07 
 
 
184 aa  51.6  0.000005  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0158393  n/a   
 
 
-
 
NC_008835  BMA10229_1984  putative type IV pilus biogenesis protein  28.07 
 
 
196 aa  51.6  0.000006  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0663  putative type IV pilus biogenesis protein  28.07 
 
 
196 aa  51.6  0.000006  Burkholderia mallei NCTC 10247  Bacteria  normal  0.655002  n/a   
 
 
-
 
NC_007650  BTH_II0774  type IV pilus biogenesis protein, putative  28.49 
 
 
183 aa  49.7  0.00002  Burkholderia thailandensis E264  Bacteria  normal  0.406536  n/a   
 
 
-
 
NC_010515  Bcenmc03_5914  PilS domain-containing protein  30.77 
 
 
202 aa  49.3  0.00003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.353424  hitchhiker  0.00844308 
 
 
-
 
NC_007950  Bpro_5446  putative type IV pilus biogenesis protein  28.82 
 
 
187 aa  48.5  0.00005  Polaromonas sp. JS666  Bacteria  normal  0.0279047  normal  0.0743907 
 
 
-
 
NC_007949  Bpro_5245  type IV pilus biogenesis protein, putative  29.41 
 
 
179 aa  47.4  0.0001  Polaromonas sp. JS666  Bacteria  normal  0.718378  normal 
 
 
-
 
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