| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0065 |
|---|
| Symbol | |
|---|
| ID | 5384113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009704 |
|---|
| Strand | + |
|---|
| Start bp | 24517 |
|---|
| End bp | 25023 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640857071 |
|---|
| Product | putative type IV secretion system protein PilS2 |
|---|
| Protein accession | YP_001393260 |
|---|
| Protein GI | 153930579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 82 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT TAAAGAAAGG TCTTAACGCT ATTACTGATG AAACGATTGC TAAAGTCGTT
GGCTTTCTAT TCCTGGCAGG TGTGGTTGTT GCCGGTGTTG TTCTAAATGG TAAAATAGGC
TCAACAACAA TGGTGAATGC AATGAGTACA TTACTCAATG AAGCTAAGGG GTTAAGAACG
TCAGCGGGGT ACGGTACAGG AGATCTAACG CCAGCGTTGA TACGCTCAAA ATCCATTCAG
AAAGGGCTAA AAATTGATGG TGATAAACTT TATAACCCAA CTAACGGGCC TGTCACTATT
ACGGGATCTG GAATGACCTT TACATTAGCA ACCAGTAAAG TGAAAGATGA AGATTGTATG
AAACTGGCGA CAACATTAAG TGGTGCTGAT ATTGAGTCAA TGAAGATAAA TAGCGGCTCA
ACCGTAACAA GTGAAATGTC ACAAATAGAT GCGGCTAATC AATGCAACGC AGGAAAAGAA
AATACAATTT CAATTACTTC TTACTAA
|
|---|
| Protein sequence | MKILKKGLNA ITDETIAKVV GFLFLAGVVV AGVVLNGKIG STTMVNAMST LLNEAKGLRT
SAGYGTGDLT PALIRSKSIQ KGLKIDGDKL YNPTNGPVTI TGSGMTFTLA TSKVKDEDCM
KLATTLSGAD IESMKINSGS TVTSEMSQID AANQCNAGKE NTISITSY
|
|---|
| |