Gene Bcenmc03_5914 details

Gene Information

• Locus tag: Bcenmc03_5914
• ID: 6128718
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia MC0-3
• Kingdom: Bacteria
• Replicon accession: NC_010515
• Strand: +
• Start bp: 3110294
• End bp: 3110902
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641652998
• Product: PilS domain-containing protein
• Protein accession: YP_001779525
• Protein GI: 170738265

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.353424
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.00844308
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAAGCGG TCATCACGCA CCATGGGATG CCGAGGCGAA CGAAGCGGCG CGACGTCGCG 
CGCATGCCGC CGCCGGCATG GGGGCCCGCG TACCCGGGCG CCGCACTGCA GCGCGGCGCG 
TCGCTGCTCG AGGCGATTTC CTATCTCGGC ATCGCGGCGA TCGTCGTGAT CGGCGCGATC 
GCGCTGCTGG CCGGCGCATT CAGCAGCGCG AACACGAATT CGATCACGGA GCAGGTCAAC 
GCGATCCAGA GCGGCGTGAA AAAGCTGTAC ATGGGGCAGT CGGCGAGCTA CGCGAACCTG 
TCGAATTCGG TCCTGGCGAG CGCCGGCGTG TTTCCGTCGA CCCTCGCGCC AGCGTCCGGC 
AGCGGCGCCA TCACCAACAT GTGGAACGGC ACGATCACGG TCGCGGCGGC CACGAACAAC 
AGCAACCAGT TCACGATCAC CTATACGAAC GTGCCGCGCA GCGTGTGCGT CAACAGCGTG 
ACCGCGGGCG GCAGCTGGAT CTCGATCACC GTCAACGAGA CGGCGCTCAC GCTGCCCGCA 
ACGCCGGACA GTGCGGCGAC CGCCTGCGCG AGCGGCGACA CGAATACGGT GGCCTGGACC 
TCGACCTGA 

 

Protein sequence

MKAVITHHGM PRRTKRRDVA RMPPPAWGPA YPGAALQRGA SLLEAISYLG IAAIVVIGAI 
ALLAGAFSSA NTNSITEQVN AIQSGVKKLY MGQSASYANL SNSVLASAGV FPSTLAPASG 
SGAITNMWNG TITVAAATNN SNQFTITYTN VPRSVCVNSV TAGGSWISIT VNETALTLPA 
TPDSAATACA SGDTNTVAWT ST