Gene Psyr_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1512 
Symbol 
ID3367011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1698449 
End bp1698973 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content57% 
IMG OID637651854 
Productprepilin 
Protein accessionYP_234600 
Protein GI66044759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA CCACTCACTC CGCTCGGGCG AACCAGATCG GTTATATCTC GATTGAATTG 
CTCTTCGTTC TCATCGTTAT CCTGATCGGG ATGGGCTACG CCCTTTACAA CGGTTGGGGC
GCGATGGGCA GTTCGGACGT CAACAACGAA CAGGGTAACG TCGGTCAATT GATCGCGAAC
ACTCGCAAGC TCAAAGGCAG TACCGGTTAC GGAGCGTCAG GGACCGATCT GATCGCCCAG
CTCAGCTCGA TACGTGGCCT GCCCAATATG TCGTTCTCCA GCGGCAAGCT CTACAACGCC
TGGAGTGGCC AGGTCACTGT GGTTGCCAAC GGGATGACAT TCACCGTGAC CGAGGCCGGT
TTGCCCCAAG ATGCCTGTGT GACACTGGCC ACGAAGATTG GACGCGGGCA GAAGGTCACC
ACCTCTATCA ATGGCGGCAC AGCTGTGAAC GGCGAGGTGA GTTCAGCTGC TGCCACCAGT
GGCTGCTCTA CTGATAGCAA CACGTTGGCT TGGACGGCCT ACTGA
 
Protein sequence
MQNTTHSARA NQIGYISIEL LFVLIVILIG MGYALYNGWG AMGSSDVNNE QGNVGQLIAN 
TRKLKGSTGY GASGTDLIAQ LSSIRGLPNM SFSSGKLYNA WSGQVTVVAN GMTFTVTEAG
LPQDACVTLA TKIGRGQKVT TSINGGTAVN GEVSSAAATS GCSTDSNTLA WTAY