| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5446 |
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| Symbol | |
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| ID | 4016405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 197951 |
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| End bp | 198514 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637945066 |
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| Product | putative type IV pilus biogenesis protein |
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| Protein accession | YP_552198 |
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| Protein GI | 91791248 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0279047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0743907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTTTTA ACCCGGAGGT AACTATGAAA GTGTCTATGA AATCCGTTTC CAAATTCAAA
TCCCAGGCAG GTCTTACCCT CATCGAGCTG ATTGCCTCGC TGGCAATTTT GGCGCTCGTC
ATTGGCGGTT CCCTTTCACT GTACTCAAGC GCAACAAGCA GCCAGGGATC GACCCAAATG
ACGTCAGAGC TCAGTGCGAT TCGTGCGGCA ACAAAATCGC TGTTCTACGG CCAGGGCGGG
TACGGTACCG CGAACTTGAA TCAGGTATTG GTTAGCGCCA ATAAGGTGCC ATCGACCATT
GTGGTTACGG CGGGTACGCC GCCCACCCTT ACCAACAGCC AAAACGGTAC CGTCTCGGTG
GTTGGCGCCA CCGCGAACTT CTCGATCACT ACCACCAGCG TGCCAACTGA CATTTGCACC
AGCGTGCTGT CTACGACTGC TGGTTGGGTT TCAGTGAAAG TCGGTTCTCA GGCGGCGATT
ACCTCATTCC CCGTTGGACC CGCCACCGCT TCGACCCAAT GTGCAGCTGC TGCGACGCAG
ACTCTTGTCT TTACTTCTGC CTAA
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| Protein sequence | MFFNPEVTMK VSMKSVSKFK SQAGLTLIEL IASLAILALV IGGSLSLYSS ATSSQGSTQM
TSELSAIRAA TKSLFYGQGG YGTANLNQVL VSANKVPSTI VVTAGTPPTL TNSQNGTVSV
VGATANFSIT TTSVPTDICT SVLSTTAGWV SVKVGSQAAI TSFPVGPATA STQCAAAATQ
TLVFTSA
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