16 homologs were found in PanDaTox collection
for query gene Oant_1548 on replicon NC_009667
Organism: Ochrobactrum anthropi ATCC 49188



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009667  Oant_1548  TRAP-type uncharacterized transport system periplasmic component-like protein  100 
 
 
296 aa  606  9.999999999999999e-173  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.127714  n/a   
 
 
-
 
NC_011894  Mnod_4237  TRAP-type uncharacterized transport system periplasmic component-like protein  31.65 
 
 
293 aa  120  1.9999999999999998e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0357468  n/a   
 
 
-
 
NC_007204  Psyc_0746  TRAP-T family transporter periplasmic substrate binding subunit  25.44 
 
 
344 aa  49.7  0.00006  Psychrobacter arcticus 273-4  Bacteria  normal  0.842378  normal 
 
 
-
 
NC_007969  Pcryo_0741  TRAP transporter solute receptor TAXI family protein  25.44 
 
 
348 aa  49.7  0.00006  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0356  hypothetical protein  29.11 
 
 
324 aa  48.5  0.0001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.097907  n/a   
 
 
-
 
NC_009439  Pmen_2949  TRAP transporter solute receptor TAXI family protein  23.53 
 
 
318 aa  48.1  0.0002  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0733999 
 
 
-
 
NC_009715  CCV52592_0082  immunogenic protein  31.58 
 
 
312 aa  48.1  0.0002  Campylobacter curvus 525.92  Bacteria  normal  0.0148349  n/a   
 
 
-
 
NC_007643  Rru_A0137  TRAP transporter solute receptor TAXI family protein  29.59 
 
 
350 aa  47  0.0004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.507077  n/a   
 
 
-
 
NC_008025  Dgeo_1063  TRAP transporter solute receptor TAXI family protein  27.49 
 
 
317 aa  45.8  0.0009  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_013093  Amir_6904  TRAP transporter solute receptor, TAXI family  28.89 
 
 
329 aa  45.1  0.001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2671  TRAP transporter solute receptor TAXI family protein  27.05 
 
 
325 aa  44.7  0.002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4986  TRAP transporter solute receptor TAXI family protein  26.62 
 
 
512 aa  44.7  0.002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.354924  normal 
 
 
-
 
NC_011662  Tmz1t_0725  TRAP transporter solute receptor, TAXI family  33.57 
 
 
322 aa  45.1  0.002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1556  TRAP transporter solute receptor TAXI family protein  24.27 
 
 
328 aa  42.7  0.007  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2848  immunogenic protein  28.48 
 
 
328 aa  42.7  0.008  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1890  TRAP transporter solute receptor, TAXI family  24.08 
 
 
333 aa  42.7  0.008  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.966009  normal 
 
 
-
 
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