12 homologs were found in PanDaTox collection
for query gene Namu_2078 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_2078  transcriptional regulator, XRE family  100 
 
 		 104 aa  209  2e-53  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0127791  hitchhiker  0.00785585 
 
 
-
 
NC_013440  Hoch_5705  transcriptional regulator, XRE family  35.21 
 
 		 139 aa  44.3  0.0006  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.712971 
 
 
-
 
NC_013440  Hoch_4304  transcriptional regulator, XRE family  36.36 
 
 		 131 aa  43.5  0.001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.663644 
 
 
-
 
NC_008740  Maqu_2281  XRE family transcriptional regulator  37.31 
 
 		 74 aa  42  0.003  Marinobacter aquaeolei VT8  Bacteria  normal  0.048354  n/a   
 
 
-
 
NC_009901  Spea_1891  XRE family transcriptional regulator  37.31 
 
 		 68 aa  41.6  0.004  Shewanella pealeana ATCC 700345  Bacteria  normal  0.810852  n/a   
 
 
-
 
NC_009901  Spea_3457  XRE family transcriptional regulator  37.31 
 
 		 68 aa  41.6  0.004  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3877  helix-turn-helix domain protein  48.84 
 
 		 383 aa  41.6  0.004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.862285 
 
 
-
 
NC_013093  Amir_3477  transcriptional regulator, XRE family  43.55 
 
 		 737 aa  40.8  0.006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.552103  n/a   
 
 
-
 
NC_009430  Rsph17025_4229  hypothetical protein  36.49 
 
 		 652 aa  40.4  0.008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.60873 
 
 
-
 
NC_010814  Glov_2898  transcriptional regulator, XRE family  42.59 
 
 		 83 aa  40.4  0.008  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_4237  transcriptional regulator, XRE family  34.85 
 
 		 140 aa  40.4  0.008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.55821  normal  1 
 
 
-
 
NC_013440  Hoch_4773  transcriptional regulator, XRE family  43.48 
 
 		 187 aa  40  0.01  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0282623  normal  1 
 
 
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