25 homologs were found in PanDaTox collection
for query gene Mchl_5387 on replicon NC_011758
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011758  Mchl_5387  putative sulfite:cytochrome c oxidoreductase subunit B  100 
 
 
106 aa  216  1e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4216  putative sulfite:cytochrome c oxidoreductase subunit B  64.52 
 
 
105 aa  127  5.0000000000000004e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.364562 
 
 
-
 
NC_011892  Mnod_8370  putative sulfite:cytochrome c oxidoreductase subunit B  67.86 
 
 
107 aa  127  7.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2703  putative sulfite:cytochrome c oxidoreductase subunit B  64.29 
 
 
107 aa  122  1e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2671  putative sulfite:cytochrome c oxidoreductase subunit B  61.9 
 
 
111 aa  108  2.0000000000000002e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.230975 
 
 
-
 
NC_009720  Xaut_0256  putative sulfite:cytochrome c oxidoreductase subunit B  61.9 
 
 
111 aa  108  2.0000000000000002e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  0.290356  normal  0.0100672 
 
 
-
 
NC_009720  Xaut_1454  cytochrome c oxidoreductase subunit B  50.55 
 
 
106 aa  97.8  4e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6452  putative sulfite:cytochrome c oxidoreductase subunit B  63.51 
 
 
105 aa  97.4  6e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.878245 
 
 
-
 
NC_011892  Mnod_8663  putative sulfite:cytochrome c oxidoreductase subunit B  47.75 
 
 
110 aa  96.3  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3023  cytochrome c oxidoreductase subunit B  42.86 
 
 
110 aa  76.6  0.00000000000009  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3717  putative sulfite:cytochrome c oxidoreductase subunit B  63.16 
 
 
75 aa  71.6  0.000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_3395  cytochrome c oxidoreductase subunit B  36.52 
 
 
110 aa  70.1  0.000000000009  Nitrobacter hamburgensis X14  Bacteria  normal  0.354922  n/a   
 
 
-
 
NC_003910  CPS_4930  cytochrome c family protein  42.11 
 
 
229 aa  66.2  0.0000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2691  cytochrome c family protein  37 
 
 
155 aa  62.8  0.000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.600799  normal  0.828912 
 
 
-
 
NC_014212  Mesil_2782  sulfite dehydrogenase (cytochrome) subunit SorB  54.1 
 
 
135 aa  60.5  0.000000007  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4892  sulfite:cytochrome c oxidoreductase subunit B  37.7 
 
 
218 aa  58.9  0.00000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0474093 
 
 
-
 
NC_009379  Pnuc_1486  cytochrome c, class I  29.21 
 
 
103 aa  58.2  0.00000004  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5266  hypothetical protein  47.46 
 
 
112 aa  56.6  0.0000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.536404  normal 
 
 
-
 
NC_007347  Reut_A3082  sulfite dehydrogenase (cytochrome) subunit SorB  34.34 
 
 
208 aa  56.2  0.0000002  Ralstonia eutropha JMP134  Bacteria  normal  0.299915  n/a   
 
 
-
 
NC_003295  RSc0811  sulfite:cytochrome C oxidoreductase subunit B  32.91 
 
 
123 aa  52.8  0.000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.400424 
 
 
-
 
NC_010730  SYO3AOP1_0083  cytochrome c oxidoreductase subunit B  44.07 
 
 
92 aa  52  0.000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  decreased coverage  0.00000000000280154  n/a   
 
 
-
 
NC_010552  BamMC406_4628  hypothetical protein  38.98 
 
 
144 aa  47.8  0.00005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.943942  normal 
 
 
-
 
NC_009511  Swit_0948  hypothetical protein  35.92 
 
 
112 aa  44.3  0.0005  Sphingomonas wittichii RW1  Bacteria  normal  0.356447  normal 
 
 
-
 
NC_008010  Dgeo_2837  hypothetical protein  40.32 
 
 
218 aa  43.9  0.0008  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1979  hypothetical protein  33 
 
 
116 aa  42.7  0.002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
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