18 homologs were found in PanDaTox collection
for query gene M446_6102 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_6102  ABC-type multidrug transport system ATPase and permease components-like protein  100 
 
 
357 aa  704    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0139556 
 
 
-
 
NC_011887  Mnod_8076  ABC-type multidrug transport system ATPase and permease components-like protein  77.85 
 
 
366 aa  445  1.0000000000000001e-124  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0419545  n/a   
 
 
-
 
NC_007519  Dde_0722  ATPase  27.42 
 
 
834 aa  117  3.9999999999999997e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3676  cyclic nucleotide-binding protein  27.41 
 
 
1043 aa  112  1.0000000000000001e-23  Ruegeria sp. TM1040  Bacteria  normal  0.88824  normal 
 
 
-
 
NC_008554  Sfum_3250  ABC transporter related  25.24 
 
 
831 aa  111  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0349  ABC transporter related  26.76 
 
 
828 aa  100  3e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2678  cyclic nucleotide-binding protein  26.23 
 
 
1017 aa  98.2  2e-19  Ruegeria sp. TM1040  Bacteria  normal  0.0916435  normal 
 
 
-
 
NC_010511  M446_2720  hypothetical protein  24.8 
 
 
962 aa  91.7  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.617854  normal  0.2359 
 
 
-
 
NC_012858  Rleg_7130  ABC transporter related  22.35 
 
 
904 aa  90.9  3e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.444817 
 
 
-
 
NC_011366  Rleg2_5980  ABC transporter related  22.35 
 
 
904 aa  90.5  4e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5606  ABC transporter nucleotide binding/ATPase protein  22.85 
 
 
904 aa  90.5  4e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_4031  ABC transporter related  26.39 
 
 
833 aa  90.1  5e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.849006  normal 
 
 
-
 
NC_011894  Mnod_4404  ABC transporter ATP-binding protein-like protein  23.4 
 
 
943 aa  85.9  9e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.467453  n/a   
 
 
-
 
NC_010725  Mpop_2552  ABC-type multidrug transport system ATPase and permease components-like protein  28.88 
 
 
429 aa  84  0.000000000000004  Methylobacterium populi BJ001  Bacteria  normal  0.263362  normal  0.0193136 
 
 
-
 
NC_009620  Smed_4600  ABC transporter related  21.93 
 
 
903 aa  83.6  0.000000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.680396  normal 
 
 
-
 
NC_010505  Mrad2831_3370  putative multidrug ABC transporter, ATP-binding and permease protein  22.16 
 
 
882 aa  83.6  0.000000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0532146 
 
 
-
 
NC_011989  Avi_3943  ABC transporter nucleotide binding/ATPase protein  22.74 
 
 
906 aa  80.9  0.00000000000003  Agrobacterium vitis S4  Bacteria  normal  0.292729  n/a   
 
 
-
 
NC_009720  Xaut_1893  ABC transporter ATP-binding protein  23.4 
 
 
887 aa  47  0.0006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.210446  normal 
 
 
-
 
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