| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4600 |
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| Symbol | |
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| ID | 5318510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1100303 |
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| End bp | 1103014 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776401 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313333 |
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| Protein GI | 150376737 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.680396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCAC TTCTTTCCCG CTACATCTGG ACACACACCC GCAAGCAGCA GCTCTGGATC
CTGCTGGTCG TGGCGCTGTC GATGGTTCCC TATTTCCTGT CCTTCGATCT GCCGAAGCAG
ATCGTCAACG GACCGATTCA GGGCGCAGGC TTCGACGGTC CCGAGGCGAC GCAACCTTTC
CTGGCGATTT CCTTCGATCT GCCGTTCTTC GGAGAGGTCA ATCTCTTTTC GGGTTTCGAT
CTCGGCAGGG AAGGGATGCT GCTGGCCCTC AGCCTGGTGT TCCTGCTGCT CGTCATCATC
AACGGGTTGT TTAAATTTTA TATCAACACC TATAAGGGCC GGCTCGGCGA ACGGCTTCTG
CGGCGCATTC GCTTTGAACT TGTCGACCGC GTCCTTCGCT TTCCGCCCGG CTATCTCAAG
CGCGTGAAGC CGGCCGAAAT CTCGACCATG ATCAAGGACG AGGTGGAGCC GATGGGCGGC
TTTACCGGCG ACGCCTTCGT ACAGCCGGCG CTGCTCGGCG GGCAGGCTCT GACGGCGCTG
ATCTTCATCC TCCTCCAAAG CTTCTGGCTA GGCATCATCG CCGCCGTCAT CGTCGCGGTT
CAGGCGATCA TCATCCCGCG CATGCGCCGG CGGCTTCTGG TCCTGGGCCG CGAGCGCCAG
CTTACGGCCC GCGAGCTTTC GGGCCGCGTC AGCGAGATCG TCGACGGCAT AGGCACGATC
CGCGCCCACG ACACGTCGAA TTATGAACGC GCCGATATTG CCGCGCGCCT CGGCCGCATA
TTCCAGATCC GCTACGACCT CTATCAATGG AAGTTTCTGG TCAAATTTCT GAACAATTTC
CTGGCGCAGG TGACGCCGTT CCTCTTCTAT TCGATCGGCG GCTATTTCGC GCTGCAGGGC
CGGCTCGACA TCGGCCAGCT CGTCGCGGTC ATCGGAGCCT ACAAGGACCT GCCGGGTCCG
CTCAAGGAAT TGATCGATTG GGACCAGGCG CGCCAGGACG TGCAGGTCAA ATATGCGCAA
GTCGTCGAGC AGTTCAGCGT CGAACCGCTG ATCGATCCCA AAGTGCAGGC GATCTCCGTC
AATCCCGCAG CGCCGCTCAC CGGTGCGCTG GCGGCCGTCA ACCTTTCGGT TGCCGACGAT
GGCGGCTCGA AAGTGGTGGA GCATATATCC CTGCAGATCC AACCGGGGGA AGCGGTCGCG
ATCACCGGCG GCACGTCTGG GGGCGGCGAG GCGCTGGCTG AGGCTTTCGG CCGGCTGACC
TGGCCCGCAA CCGGCCGGAT CGTTATTGGC GACGCCGATA TTCACAATTT GCCTGAAGCG
GTCGTCGGCC GGCGAATCTC CTACGCTTCC TCCGACGTCT TTGCCTTCCA GGGCAGCCTC
GGGGACAACC TGCTCTATGG GCTGAAGCAC GCCCCGCTGA CGGAGGTGGC CTATGAGGGC
GACAGGGAGG TTCACCGAAA ATGGGAGCTT GTGGAGGCAA AACTAGCAGG CAATCCGCAT
TACGACCTGA ACAGCGACTG GATTGACTAC CAGGCGGCGG GTGCGACCGG GCCAGACGAC
CTTTTCACCA AGATCAGGGC CGTGCTGGAC GTTGTCCAGC TGAGTAACGA CGTCCTTGCC
CTGGCTGTCC GTTCGACGAT CGATCCGAGC GAGCACGAAG CCTTCGCCGG CGAAATCGTG
GCGATGCGCA GTGCGCTCCG GCAGCGGCTC GAGGCTGAGA AGCTCAGTGA CCTCGTCGTG
TTCTTCGAAC CCGGTTCCTA CAATGTCGAG GCGACCGTGG GAGAGAACCT GCTCTTTGGC
ACGGTCACTG ACAATAACCG CTGGGAGATG GCACTTGAAG AACATCCCTT CTTCAAGACC
GTGCTGAAGC GGGCCGGCCT GCACGAGACC TTCTACGGGA TGGGGCTCGA AATCGCTGAA
AACGTCGTGG AACTGTTCCG TGACTTGCCG CCCGACCATC CTTTCTTCCA GCAGCTCACC
TTCATGACTG CGGAGGAAAT TCCGGCCTAT GAGGCGCTTC TACAGAAGGT GAGGGGGAAA
TCTCTCGAGG AAGTGTCGGA AGACGATGCC ATCAGGATCA TCCGCCTTTG CTTCGGCTAT
ATCGAGCCGC GGCATCGTTT CGGTCTGCTG ACGGAAGATC TCATGCAGAA GATCGTCGAA
GCGCGGCGCG AGTTCAGCGA CGGCCTACCG GCCGATCTCG TCGGAATTAT CGAGCACTAT
CAGCCGGACC GCTACATGGC GTCGGCCAGC ATCCTGGACA ACGTGCTCTT CGGCCGCATC
GGACACAAGC ACACCGACGG GTCCGAGCGG ATACGCGCGA TCGTGCGCGA CCTTTTCGAG
TCGCTCGGGC TTCACAACAA GGTGCTCGTC TTCGGGCTGG ATTTCGACGT CGGTGCCGGT
GGCAAGCGCC TGACGTCCGG CCAGCGCCAG AAGCTAAATC TCGCACGCGC CCTGATCCGC
GTTTCGGACT TCTACATCTT CAATCAGCCG CTCCTGGCGC TCGACCAGCG CACGCAGGAC
CAGATCACCC GGAAGGCCTT TGCGTTCCTG AGAGATGGCG AGCGCAAGCC TGCGATTTTA
TGGGTTCTGG CCAACCAGGA CCTGACGGAA CTCTTCGACC GCGTCGCGCA TTTCGAAAAC
GGACGGTTGG TGCGCGACGA ACCGGTGGAA ACGCGCTCTA CAGACAGCGA CTACAAGGAA
CTGGCATCTT GA
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| Protein sequence | MEPLLSRYIW THTRKQQLWI LLVVALSMVP YFLSFDLPKQ IVNGPIQGAG FDGPEATQPF
LAISFDLPFF GEVNLFSGFD LGREGMLLAL SLVFLLLVII NGLFKFYINT YKGRLGERLL
RRIRFELVDR VLRFPPGYLK RVKPAEISTM IKDEVEPMGG FTGDAFVQPA LLGGQALTAL
IFILLQSFWL GIIAAVIVAV QAIIIPRMRR RLLVLGRERQ LTARELSGRV SEIVDGIGTI
RAHDTSNYER ADIAARLGRI FQIRYDLYQW KFLVKFLNNF LAQVTPFLFY SIGGYFALQG
RLDIGQLVAV IGAYKDLPGP LKELIDWDQA RQDVQVKYAQ VVEQFSVEPL IDPKVQAISV
NPAAPLTGAL AAVNLSVADD GGSKVVEHIS LQIQPGEAVA ITGGTSGGGE ALAEAFGRLT
WPATGRIVIG DADIHNLPEA VVGRRISYAS SDVFAFQGSL GDNLLYGLKH APLTEVAYEG
DREVHRKWEL VEAKLAGNPH YDLNSDWIDY QAAGATGPDD LFTKIRAVLD VVQLSNDVLA
LAVRSTIDPS EHEAFAGEIV AMRSALRQRL EAEKLSDLVV FFEPGSYNVE ATVGENLLFG
TVTDNNRWEM ALEEHPFFKT VLKRAGLHET FYGMGLEIAE NVVELFRDLP PDHPFFQQLT
FMTAEEIPAY EALLQKVRGK SLEEVSEDDA IRIIRLCFGY IEPRHRFGLL TEDLMQKIVE
ARREFSDGLP ADLVGIIEHY QPDRYMASAS ILDNVLFGRI GHKHTDGSER IRAIVRDLFE
SLGLHNKVLV FGLDFDVGAG GKRLTSGQRQ KLNLARALIR VSDFYIFNQP LLALDQRTQD
QITRKAFAFL RDGERKPAIL WVLANQDLTE LFDRVAHFEN GRLVRDEPVE TRSTDSDYKE
LAS
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