9 homologs were found in PanDaTox collection
for query gene LACR_1608 on replicon NC_008527
Organism: Lactococcus lactis subsp. cremoris SK11



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008527  LACR_1608  transcriptional regulator  100 
 
 
176 aa  360  6e-99  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0667725  n/a   
 
 
-
 
NC_008527  LACR_2558  transcriptional regulator  27.63 
 
 
175 aa  62  0.000000005  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0483  transcriptional regulator  25 
 
 
172 aa  48.5  0.00005  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000428437  normal 
 
 
-
 
NC_013170  Ccur_00570  transcriptional regulator, tetR family  20.21 
 
 
218 aa  45.8  0.0003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_3307  transcriptional regulator, TetR family  22.22 
 
 
180 aa  45.8  0.0003  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0386151  n/a   
 
 
-
 
NC_013204  Elen_0969  putative transcriptional regulator, TetR family  26.35 
 
 
214 aa  43.1  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  0.043647  hitchhiker  0.0000349278 
 
 
-
 
NC_011898  Ccel_2357  transcriptional regulator, TetR family  23.4 
 
 
190 aa  42.7  0.003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0067585  n/a   
 
 
-
 
NC_013165  Shel_06360  transcriptional regulator  25.76 
 
 
201 aa  42  0.004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.589658  normal 
 
 
-
 
NC_013204  Elen_0254  hypothetical protein  37.5 
 
 
188 aa  41.6  0.005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>