Gene Sterm_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3307 
Symbol 
ID8598759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp3480264 
End bp3480806 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content31% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003310078 
Protein GI269121901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0386151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGCA AAGTGGAACA GAAAATACAG AGTAAAGGCT TGATAGTGCA GTCATTGGTA 
TATTTAATGA GAAAGAAATC TTTTCATGAG ATAAAAATAA CAGAAATATG TAAAAAAGCA 
GGAGTATCAA GGCTTAGTTA TTACAGAAAT TTTGAAAGCA AAGAGGATAT TGTTCTATAT 
TATTTCAACA ATAACTTTGA AAAAATTATA GGGAAAATAA CTATGATGGA AAGTATCAGC 
TACAGGGAGC TGATTGAAAT GCTGTTTCTG CATTTTATGG AGAATCTGGA AGAGAATAAA 
CTGTTTTTTC GTGATAAGCT GATATATCTG ATATCTATTT CTACAGATGA GTACATGAAA 
AAATTCCTGA AAGTGGTTTT TAAAGATAAT GATCATGATG ATTTTATACT GAAATTTTTA 
CAGGGCGGTA TAATGAATAT AATGATAGGA CTCATGACAG GCGATGAAAA TCACAGTGTG 
GAGGATATTG CTGTAAGGAT AGACTTTATA TATAAAATGT TAAGCGAAAG AACAGAAATC 
TGA
 
Protein sequence
MGSKVEQKIQ SKGLIVQSLV YLMRKKSFHE IKITEICKKA GVSRLSYYRN FESKEDIVLY 
YFNNNFEKII GKITMMESIS YRELIEMLFL HFMENLEENK LFFRDKLIYL ISISTDEYMK 
KFLKVVFKDN DHDDFILKFL QGGIMNIMIG LMTGDENHSV EDIAVRIDFI YKMLSERTEI