Gene Shel_06360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06360 
Symbol 
ID8394528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp742677 
End bp743282 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content57% 
IMG OID644985398 
Producttranscriptional regulator 
Protein accessionYP_003143044 
Protein GI257063372 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.589658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGACT CCGCAAAAAC CGACAAGCGC GTGATGCGTA CGCGCAAAGC CATTGGCGAG 
GCGTTCGCCC GCCTGTTGGA GACGACCGAA TACAGCAAGG TCACGGTCAG TGCAATCGCG
CGCGAGGCAG ACGTCAACCG CAAGACCTTC TATCTGCACT ACGACTCGGT CGAGGACGTG
CTTGCCCAAC TTCTGGAAGA GCGCATCGCC GAGATCGTCG AATCGGACAA GCAGCTCGTC
GATTGCGAAC ACGTCGCGCC CTATATGAAA AAGGTGTTCT GCGACCTGCT GACGATGATG
GACGAAGCGC CTATATTCAG GGACAACGTG ATCAAGTACG TTTCCTACAA CCGGTTGCTG
GACATGGCGA AGGATCCCAT TCTGGAGAAC ATCCATCACC AGCGGCAGGC TTTGGGGATG
CCTAAGAGGC CCGACATCGA ATACGTGGTG ACCATGTATC TGGGCGGACT GTATGCGCTG
TACGAGACGT GGAGCCATGA CGAAGCGACC GACATGACCC TTGAGAATCT TGCCGAAACC
GCCTGCGGCC TGCTGGAACC CGGCGTCCGG GAGATGCTCA ACGAGGATCG CCAGTCTTTA
CAATAG
 
Protein sequence
MKDSAKTDKR VMRTRKAIGE AFARLLETTE YSKVTVSAIA READVNRKTF YLHYDSVEDV 
LAQLLEERIA EIVESDKQLV DCEHVAPYMK KVFCDLLTMM DEAPIFRDNV IKYVSYNRLL
DMAKDPILEN IHHQRQALGM PKRPDIEYVV TMYLGGLYAL YETWSHDEAT DMTLENLAET
ACGLLEPGVR EMLNEDRQSL Q