7 homologs were found in PanDaTox collection
for query gene Gbro_0555 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013441  Gbro_0555  hypothetical protein  100 
 
 		 150 aa  296  5e-80  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008703  Mkms_5785  Type IV secretory pathway VirD4 components-like protein  34.27 
 
 		 471 aa  68.2  0.00000000004  Mycobacterium sp. KMS  Bacteria  normal  0.435047  normal  0.0557182 
 
 
-
 
NC_013131  Caci_8942  conjugative transfer gene complex protein  30.58 
 
 		 613 aa  47.8  0.00005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.312755  normal  0.363977 
 
 
-
 
NC_009955  Dshi_3655  TRAG family protein  40 
 
 		 667 aa  43.1  0.001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.291322  decreased coverage  0.00000244512 
 
 
-
 
NC_008042  TM1040_3794  TRAG protein  40 
 
 		 668 aa  42.7  0.002  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009957  Dshi_3988  TRAG family protein  40 
 
 		 670 aa  42.7  0.002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.420427  n/a   
 
 
-
 
NC_007777  Francci3_3305  Type IV secretory pathway VirD4 components-like  36.67 
 
 		 690 aa  40.8  0.007  Frankia sp. CcI3  Bacteria  decreased coverage  0.000882445  normal  0.114382 
 
 
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