14 homologs were found in PanDaTox collection
for query gene Mkms_5785 on replicon NC_008703
Organism: Mycobacterium sp. KMS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008703  Mkms_5785  Type IV secretory pathway VirD4 components-like protein  100 
 
 		 471 aa  951    Mycobacterium sp. KMS  Bacteria  normal  0.435047  normal  0.0557182 
 
 
-
 
NC_013441  Gbro_0557  hypothetical protein  30.1 
 
 		 302 aa  78.6  0.0000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.919017  n/a   
 
 
-
 
NC_008697  Noca_4706  Type IV secretory pathway VirD4 components-like protein  25 
 
 		 490 aa  63.9  0.000000006  Nocardioides sp. JS614  Bacteria  normal  0.220064  normal  0.843758 
 
 
-
 
NC_013441  Gbro_0555  hypothetical protein  34 
 
 		 150 aa  63.9  0.000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1576  Type IV secretory pathway VirD4 components-like  23.62 
 
 		 453 aa  62.4  0.00000002  Nocardioides sp. JS614  Bacteria  normal  0.540203  n/a   
 
 
-
 
NC_013757  Gobs_0689  Type IV secretory pathway VirD4 protein-like protein  26.57 
 
 		 636 aa  57.4  0.0000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.01424  n/a   
 
 
-
 
NC_009921  Franean1_1381  Type IV secretory pathway VirD4 protein-like protein  24.1 
 
 		 656 aa  55.8  0.000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2246  Type IV secretory pathway VirD4 components-like  23.43 
 
 		 506 aa  51.2  0.00004  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8942  conjugative transfer gene complex protein  23.37 
 
 		 613 aa  50.8  0.00006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.312755  normal  0.363977 
 
 
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NC_007777  Francci3_3305  Type IV secretory pathway VirD4 components-like  23.85 
 
 		 690 aa  48.5  0.0003  Frankia sp. CcI3  Bacteria  decreased coverage  0.000882445  normal  0.114382 
 
 
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NC_013530  Xcel_1575  Type IV secretory pathway VirD4 protein-like protein  24.64 
 
 		 592 aa  45.4  0.002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.016741  n/a   
 
 
-
 
NC_013530  Xcel_2343  Type IV secretory pathway VirD4 protein-like protein  24.64 
 
 		 592 aa  45.1  0.003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.970374  n/a   
 
 
-
 
NC_013124  Afer_0604  hypothetical protein  25.78 
 
 		 399 aa  44.3  0.005  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_06490  type IV secretory pathway, VirD4 component  23.81 
 
 		 634 aa  43.5  0.009  Micrococcus luteus NCTC 2665  Bacteria  decreased coverage  0.00928914  n/a   
 
 
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