12 homologs were found in PanDaTox collection
for query gene Gbem_1388 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_1388  branched-chain amino acid transport  100 
 
 		 103 aa  196  1.0000000000000001e-49  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000854559  n/a   
 
 
-
 
NC_012918  GM21_2894  branched-chain amino acid transport  95.1 
 
 		 103 aa  162  1.0000000000000001e-39  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.24933e-22 
 
 
-
 
NC_007519  Dde_3177  hypothetical protein  47.92 
 
 		 99 aa  63.9  0.0000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_013201  Hmuk_3354  branched-chain amino acid transport  32.98 
 
 		 103 aa  52.4  0.000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0254593  normal  1 
 
 
-
 
NC_013743  Htur_0696  branched-chain amino acid transport  32.65 
 
 		 104 aa  49.3  0.00002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
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NC_013922  Nmag_2666  branched-chain amino acid transport  35.79 
 
 		 105 aa  48.1  0.00004  Natrialba magadii ATCC 43099  Archaea  normal  0.404817  n/a   
 
 
-
 
NC_011004  Rpal_1319  branched-chain amino acid transport  38.54 
 
 		 105 aa  45.1  0.0004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_4738  branched-chain amino acid transport  36.56 
 
 		 105 aa  42  0.003  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_1825  branched chain amino acid ABC transporter  33.68 
 
 		 105 aa  41.6  0.004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0791609  normal  0.220841 
 
 
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NC_011894  Mnod_1118  branched-chain amino acid transport  40.62 
 
 		 106 aa  41.2  0.005  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0609203  n/a   
 
 
-
 
NC_007958  RPD_4139  branched-chain amino acid transport  32.63 
 
 		 105 aa  40.8  0.007  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009668  Oant_3947  branched-chain amino acid transport  33.72 
 
 		 99 aa  40.4  0.008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
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