Gene Rpal_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1319 
Symbol 
ID6408976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1387861 
End bp1388178 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content66% 
IMG OID642711218 
Productbranched-chain amino acid transport 
Protein accessionYP_001990334 
Protein GI192289729 
COG category[S] Function unknown 
COG ID[COG4541] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA TGCTCCGCAG CGACGTGATG ATTGCCTTCG CCATCATGAC TGCGGTCACG 
GTCGCGTCCC GGCTCGGCGG CTACTTCATG ATGCGCTATG TCGACGTCAC GCCGCGGGTG
AGGCGGATGC TCGATGCGCT GCCCGGCTCG ATTATCGTCG CGGCGGCGCT GCCGGTGGCG
GTCAATGGCG GGCCGATCGT CATGCTCGCG CTGGCGGCCG CGATCGCGGT GAGTGTGCTG
CGTCGCAACG ACTTTCTGGC AGTCATAACC GGTATGTTAG TAGCGGCGGC GGCCCGAGCT
CTGGGGCTGC CGGGCTAG
 
Protein sequence
MTDMLRSDVM IAFAIMTAVT VASRLGGYFM MRYVDVTPRV RRMLDALPGS IIVAAALPVA 
VNGGPIVMLA LAAAIAVSVL RRNDFLAVIT GMLVAAAARA LGLPG