15 homologs were found in PanDaTox collection
for query gene RPB_1825 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_1825  branched chain amino acid ABC transporter  100 
 
 
105 aa  197  3e-50  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0791609  normal  0.220841 
 
 
-
 
NC_007958  RPD_4139  branched-chain amino acid transport  89.52 
 
 
105 aa  182  1.0000000000000001e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1319  branched-chain amino acid transport  84.76 
 
 
105 aa  172  1.9999999999999998e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4738  branched-chain amino acid transport  85.71 
 
 
105 aa  153  7e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0696  branched-chain amino acid transport  36.89 
 
 
104 aa  60.1  0.00000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009720  Xaut_1764  branched-chain amino acid transport  43.75 
 
 
101 aa  57.4  0.00000006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.240182  normal  0.0440928 
 
 
-
 
NC_010511  M446_2156  branched-chain amino acid transport  47.87 
 
 
106 aa  57.4  0.00000006  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.716667 
 
 
-
 
NC_013201  Hmuk_3354  branched-chain amino acid transport  33.72 
 
 
103 aa  57.8  0.00000006  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0254593  normal 
 
 
-
 
NC_009636  Smed_0733  branched-chain amino acid transport  36.73 
 
 
100 aa  52.8  0.000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.257385  normal  0.712483 
 
 
-
 
NC_008825  Mpe_A2037  putative transmembrane protein  41.43 
 
 
102 aa  50.8  0.000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.485206  normal 
 
 
-
 
NC_011894  Mnod_1118  branched-chain amino acid transport  44.71 
 
 
106 aa  48.5  0.00003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0609203  n/a   
 
 
-
 
NC_013922  Nmag_2666  branched-chain amino acid transport  42 
 
 
105 aa  47.8  0.00006  Natrialba magadii ATCC 43099  Archaea  normal  0.404817  n/a   
 
 
-
 
NC_007519  Dde_3177  hypothetical protein  40 
 
 
99 aa  46.2  0.0002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2876  branched-chain amino acid transport  36.84 
 
 
103 aa  45.8  0.0002  Marinobacter aquaeolei VT8  Bacteria  normal  0.0584958  n/a   
 
 
-
 
NC_013457  VEA_000052  putative transmembrane protein  39.58 
 
 
102 aa  42.7  0.002  Vibrio sp. Ex25  Bacteria  normal  0.323073  n/a   
 
 
-
 
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