Gene RPD_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4139 
Symbol 
ID4024661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4608423 
End bp4608740 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content66% 
IMG OID637964347 
Productbranched-chain amino acid transport 
Protein accessionYP_571259 
Protein GI91978600 
COG category[S] Function unknown 
COG ID[COG4541] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC TGTTGCGCAG CGACGTGATG ATCGCGTTCG CGGTGATGAC CGCGGTGACT 
GTGGCCTCGC GGCTCGGCGG CTACTGGCTG ATGGGCTACG TCAACGTCAC GCCGCGGGTG
CGGCGGATGC TCGACGCGCT ACCCGGTTCG ATCATCGTCG GCGCGGCGCT GCCGGTCGCG
GTCAATGGCG GCCCGATCGT GATGTTCGCG ATCGCCGCGG CGATGGCCGT CAGTATCATT
CGCCGCAATG ATTTCATGGC CGTGATAACC GGTATGTCGG TAGCTGCTTT GGCGCGCGCG
CTCGGCTTCG GCGGCTAG
 
Protein sequence
MSELLRSDVM IAFAVMTAVT VASRLGGYWL MGYVNVTPRV RRMLDALPGS IIVGAALPVA 
VNGGPIVMFA IAAAMAVSII RRNDFMAVIT GMSVAALARA LGFGG