19 homologs were found in PanDaTox collection
for query gene Daro_3980 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007298  Daro_3980  hypothetical protein  100 
 
 		 308 aa  616  1e-175  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
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NC_007643  Rru_A1167  putative hydrogenase expression/formation protein HupK  39.25 
 
 		 406 aa  65.5  0.000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.819635  n/a   
 
 
-
 
NC_010581  Bind_1158  putative hydrogenase expression/formation protein HupK  28.39 
 
 		 329 aa  57  0.0000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.846378  normal  1 
 
 
-
 
NC_012560  Avin_50500  hydrogenase expression/formation protein HoxV  40.86 
 
 		 348 aa  55.5  0.000001  Azotobacter vinelandii DJ  Bacteria  normal  0.102569  n/a   
 
 
-
 
NC_010627  Bphy_7257  HupK protein  37.08 
 
 		 336 aa  48.9  0.0001  Burkholderia phymatum STM815  Bacteria  normal  0.53403  normal  0.383588 
 
 
-
 
NC_008825  Mpe_A2817  HupK protein  33.01 
 
 		 388 aa  48.9  0.0001  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
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NC_007908  Rfer_4118  putative hydrogenase expression/formation protein HupK  37.36 
 
 		 391 aa  48.1  0.0002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2020  hypothetical protein  34.09 
 
 		 379 aa  48.1  0.0002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1172  coenzyme F420-reducing hydrogenase alpha subunit-like  29.75 
 
 		 370 aa  47.4  0.0003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.903456  normal  1 
 
 
-
 
NC_012560  Avin_50580  Membrane bound nickel-dependent hydrogenase, large subunit, HoxG  27.19 
 
 		 602 aa  46.2  0.0007  Azotobacter vinelandii DJ  Bacteria  normal  0.980558  n/a   
 
 
-
 
NC_008781  Pnap_1954  nickel-dependent hydrogenase, large subunit  31.07 
 
 		 485 aa  44.7  0.002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.935689  normal  1 
 
 
-
 
NC_008576  Mmc1_2497  Ni,Fe-hydrogenase I large subunit  33.66 
 
 		 379 aa  44.3  0.002  Magnetococcus sp. MC-1  Bacteria  normal  0.633578  normal  0.13514 
 
 
-
 
NC_010581  Bind_1147  nickel-dependent hydrogenase large subunit  29.73 
 
 		 488 aa  43.5  0.005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1163  nickel-dependent hydrogenase, large subunit  33.64 
 
 		 597 aa  43.5  0.005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.28682  normal  1 
 
 
-
 
NC_007643  Rru_A1162  nickel-dependent hydrogenase, large subunit  31.86 
 
 		 596 aa  43.5  0.005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.122791  n/a   
 
 
-
 
NC_009523  RoseRS_2320  nickel-dependent hydrogenase, large subunit  34.83 
 
 		 570 aa  43.1  0.006  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_2181  putative hydrogenase expression/formation protein HupK  25.88 
 
 		 329 aa  43.1  0.006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.124929  normal  0.212664 
 
 
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NC_009767  Rcas_3147  nickel-dependent hydrogenase large subunit  34.83 
 
 		 570 aa  42.7  0.008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0165  nickel-iron hydrogenase, large subunit  27.97 
 
 		 597 aa  42.4  0.009  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0497936  n/a   
 
 
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