| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1954 |
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| Symbol | |
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| ID | 4686672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2076136 |
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| End bp | 2077593 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834962 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_982184 |
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| Protein GI | 121604855 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.935689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC TGCTTGTCGG TCCCTTTAAC CGCGTCGAGG GCGACCTCGA AGTCACGCTG
GACATTGATG ACGGGCGGGT CACCTCCGCC CGGGTGAACG CCCCGATGTA CCGGGGGTTC
GAGCAGATCT TGCAGGGCAA GAACCCGCAC GATGCGCTGG TCTATGTGCC GCGCATCTGC
GGCATCTGCT CGGTCTCCCA GTCCGTGGCC TGCGCCCGTG CCCTGGCCAG CCTGGGCGGC
ATAGCACCGC CGCCCAATGG CCAGCATGTC ACCAATGTGA TGCTGGCCAC CGAAAACCTG
GCCGACCACC TGACGCATTT CTACCTGTTC TTCATGCCTG ACTTCACCCG GCCGGTGTAT
GCCCGGCAGC CATGGCATGC CGAGGCCTTG CGCCGCTTTG CCCCGCAGAC GGGCGAGCAG
ACCCGCGCCG CAATTGCGGC GCGCCAGCGC TGGTTCACGC TGCTCGGCAC GCTGGCCGGC
AAATGGCCGC ACACCCAGAG CGTCGAAGCC GGCGGCTCGA CCCGCCCGGT GGAGGCGGCC
GAGCGGATTC GCCTGCTGGC CAAGGTGCGC GAATTCCGCA GCTTCCTGGA GCGCGAGCTG
TTCGCAGCCC CGCTGGAGTT GATCACCGGC CTGGACAGCG AGCAAGCCCT GTGGGACTGG
CATGCCCAAG ACCCGTGGCG TGGTGATTTC CGGCTGTTCC TGAGCATGGT GCAAAGTGCC
GGACTCGCCA GCCTGGGGTC GGGGCCGGGC CGCTACCTCA GTTACGGGGC CTATCCGCAG
CCGGGCGGTG GCTTTGAATT CGGCAGCGGG GTCTGGCTTG CCAGCACGGG CAGCTTGATG
CCGCTTGACG TGAGTGGCAT CCGCGAAGAC GCGACCCATG CCTGGCTGTC CGATGCCGCC
GGGCCGCGCC ATCCTGTCGA AGGCATCACG CTGCCCGATA TTGACAAACC CGATGCCTAC
ACCTGGAACA AGGCGCCCCG CCTGGCCGGG CAGGTGATCG AGACCGGCGC CATTGCCCGG
CAGCTGGCGG CGGCTCATCC GCTGGTGCTC GATGCGGTGC GGCGCCATGG CGGCACGGTT
TTCACACGGG TACTGGCCCG CGTGCTGGAA CTGGCCCGCG TGGTGCCCAT GATGGAAAAC
TGGCTGCGGC AATTGCAGCC CAACGCGCCT TATTGCGTGC CCAGCCCGGC TTTTACCGAA
GGCGTGGGCG TGGGCCTGAG CGAAGCCGCG CGCGGCAGCC TGGGCCACTG GGTGGTAGCC
AGCCGGGGCC GGATCGCCAA TTACCAGATC GTGGCCCCGA CGACCTGGAA CTTCTCACCG
CGTGACAAGG CGGGCACGGC GGGCGCACTG GAGCAGGCGC TGGAAGGCGC CCTGGTACAG
CCGGGCGAAG CCACGCCAGT CTCGGTGCAG CATATCGTGC GCTCGTTCGA CCCTTGCATG
GTGTGTACGG TGCATTGA
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| Protein sequence | MTRLLVGPFN RVEGDLEVTL DIDDGRVTSA RVNAPMYRGF EQILQGKNPH DALVYVPRIC
GICSVSQSVA CARALASLGG IAPPPNGQHV TNVMLATENL ADHLTHFYLF FMPDFTRPVY
ARQPWHAEAL RRFAPQTGEQ TRAAIAARQR WFTLLGTLAG KWPHTQSVEA GGSTRPVEAA
ERIRLLAKVR EFRSFLEREL FAAPLELITG LDSEQALWDW HAQDPWRGDF RLFLSMVQSA
GLASLGSGPG RYLSYGAYPQ PGGGFEFGSG VWLASTGSLM PLDVSGIRED ATHAWLSDAA
GPRHPVEGIT LPDIDKPDAY TWNKAPRLAG QVIETGAIAR QLAAAHPLVL DAVRRHGGTV
FTRVLARVLE LARVVPMMEN WLRQLQPNAP YCVPSPAFTE GVGVGLSEAA RGSLGHWVVA
SRGRIANYQI VAPTTWNFSP RDKAGTAGAL EQALEGALVQ PGEATPVSVQ HIVRSFDPCM
VCTVH
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