| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2320 |
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| Symbol | |
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| ID | 5209287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2872892 |
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| End bp | 2874604 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595925 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001276649 |
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| Protein GI | 148656444 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGA TCGCCATCGA TCCAATCACC CGTATCGAAG GGCATCTGCG TATCGAAGCG
CAGATCGAGC GGGGACGCGT GGTTGACGCC TGGAGCAGTT CAACGATGTT TCGCGGTGTG
GAGATCATCC TGAGGGGGCG CGATCCGCGC GATGCGTGGG TGTTCACCCA GCGCATCTGC
GGCGTCTGCA CCACCGTTCA TGCGCTTGCG TCGGTGCGCG CCGTCGAGAA TGCGCTGGAT
ATTCAGATTC CCGACAATGC CCGGCTTGTT CGCAACATCA TTGCCGGCGC GCAGTATGTG
CAGGATCACG TCATCCATTT TTACCACCTG CACGCGCTGG ACTGGGTCGA TATCGTCAGC
GCGCTCAAAG CCGACCCGGT TCAGACATCG GAACTGGCGC AGAGCATTTC CGACTGGCCC
AAGTCATCGC CTGCCTACTT CAAAGGCGTC CAGAGCCGCG TGCAGAAGTT TGTGGACAGC
GGGCAACTGG GCATATTCGG CAATGCGTAC TGGGGACACC CGGCGTATGC ACTGCCGCCC
GAAGCCAATC TGATGGCGGT AGCGCACTAC CTGGAGGCGC TGGAGTGGCA AAAGGACATC
ATCAGGATTC ACGCGATCCT GGGCGGCAAG AATCCCCACC CGCAGACGTA TCTCGTCGGC
GGGATGGCGA CGCCGCTTGA TCCGAACGCG CAGCAGGCGA TCAATACCAT TCGCATTGCG
CAGTTGAAGA CGCTGGCAGA GCAGGCGCGC ACGTTTGTGA ATAAAGTCTA CATCCCTGAC
ATCCTCGCCA TTGCTTCATT CTACAAAGAC TGGGCCGGGC TTGGCGCAGG TGTGGGCAAT
TATCTCTCCT ACGGCGATTT CCCGGCAGCG AAAGACAGCA ATGTCGCCAG TTACTGGCTG
CCGCGCGGCG TCATTCTCAA CAAGAATATC GACGAGAAAC CGCTGCCGAT GAGTCACGAG
AAGGTGACCG AGTATGTCGC CCATTCCTGG TTCCGCTACA GTGAAGGCGA TCAACAGGCG
CTGCACCCGT GGAGAGGCGA GACAATCCCC AACTACACCG GTCCTCAACC GCCGTATGAA
TGGCTCAACA CTGACAGCAA GTATTCCTGG CTTAAGACGC CGCGCTACGA CGATCAACCA
ATGGAGGTCG GACCGCTTGC CCGTATGCTC ATCGGGTATG CCGCCGGTCA GCAGCGTATT
CAGGAACTGG TCAACGCCGT GCTCAAACAG TTGGGGGTTG GTCCGGCGGC GCTCTTCTCA
ACGCTGGGAC GCACGGCGGC GCGGGCGATT GAAACGGCGC TGATCGCCGA ACTGTTGCCG
CAGTGGATCG ATGAACTGGC GGCAAACATA GCGTCTGGCA ATCTGGCGAT TCACAACAGC
ACGAAGTGGA GTCCGGCGAA CTGGCCCCAG GAGGCGGTTG GTTGGGGGTC GATGGAGGCG
CCGCGCGGAT CGCTCGGTCA CTGGGTGCGG ATCAGGGATG GCAAGATCGT CAACTATCAG
GCAGTGGTAC CAACGACCTG GAACGGATCG CCGCGTGATG CGCGTGATGT GCGTGGACCG
TATGAGGCTG CGCTGATCGA CACGCCGATC GCCGATCCGG AGCAACCGAT CGAAATTTTG
CGCACCATCC ATTCATTCGA CCCTTGCATG GCATGCGCGG TTCATCTTGT GGATGCCCGC
GGCGTTGAGA TTACCCGCGT CAAGGTGCAG TGA
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| Protein sequence | MPKIAIDPIT RIEGHLRIEA QIERGRVVDA WSSSTMFRGV EIILRGRDPR DAWVFTQRIC
GVCTTVHALA SVRAVENALD IQIPDNARLV RNIIAGAQYV QDHVIHFYHL HALDWVDIVS
ALKADPVQTS ELAQSISDWP KSSPAYFKGV QSRVQKFVDS GQLGIFGNAY WGHPAYALPP
EANLMAVAHY LEALEWQKDI IRIHAILGGK NPHPQTYLVG GMATPLDPNA QQAINTIRIA
QLKTLAEQAR TFVNKVYIPD ILAIASFYKD WAGLGAGVGN YLSYGDFPAA KDSNVASYWL
PRGVILNKNI DEKPLPMSHE KVTEYVAHSW FRYSEGDQQA LHPWRGETIP NYTGPQPPYE
WLNTDSKYSW LKTPRYDDQP MEVGPLARML IGYAAGQQRI QELVNAVLKQ LGVGPAALFS
TLGRTAARAI ETALIAELLP QWIDELAANI ASGNLAIHNS TKWSPANWPQ EAVGWGSMEA
PRGSLGHWVR IRDGKIVNYQ AVVPTTWNGS PRDARDVRGP YEAALIDTPI ADPEQPIEIL
RTIHSFDPCM ACAVHLVDAR GVEITRVKVQ
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