11 homologs were found in PanDaTox collection
for query gene Cyan7425_2404 on replicon NC_011884
Organism: Cyanothece sp. PCC 7425



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011884  Cyan7425_2404  Prolyl 4-hydroxylase alpha subunit  100 
 
 
457 aa  946    Cyanothece sp. PCC 7425  Bacteria  normal  0.758214  normal 
 
 
-
 
NC_011729  PCC7424_0709  Tetratricopeptide TPR_2 repeat protein  42.74 
 
 
864 aa  184  4.0000000000000006e-45  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.635546 
 
 
-
 
NC_008312  Tery_3466  2OG-Fe(II) oxygenase  41.78 
 
 
306 aa  178  2e-43  Trichodesmium erythraeum IMS101  Bacteria  normal  0.413684  normal 
 
 
-
 
NC_011884  Cyan7425_5157  Prolyl 4-hydroxylase alpha subunit  41.03 
 
 
309 aa  144  3e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.838814  normal  0.639881 
 
 
-
 
NC_008312  Tery_2167  tetratricopeptide TPR_2  36.21 
 
 
1014 aa  135  1.9999999999999998e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.796808 
 
 
-
 
NC_008312  Tery_1127  prolyl 4-hydroxylase, alpha subunit  35.75 
 
 
303 aa  125  1e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.328998  decreased coverage  0.000557231 
 
 
-
 
NC_007604  Synpcc7942_2480  prolyl 4-hydroxylase, alpha subunit  34.38 
 
 
300 aa  125  2e-27  Synechococcus elongatus PCC 7942  Bacteria  normal  0.019488  hitchhiker  0.0000292929 
 
 
-
 
NC_007643  Rru_A3024  prolyl 4-hydroxylase, alpha subunit  29.02 
 
 
208 aa  80.9  0.00000000000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2659  prolyl 4-hydroxylase, alpha subunit  32.62 
 
 
299 aa  76.6  0.0000000000009  Psychromonas ingrahamii 37  Bacteria  hitchhiker  0.00638484  decreased coverage  0.00126979 
 
 
-
 
NC_006369  lpl0434  hypothetical protein  25 
 
 
212 aa  49.3  0.0001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp0458  hypothetical protein  25 
 
 
212 aa  45.8  0.002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
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