Gene Rru_A3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3024 
Symbol 
ID3836469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp3481785 
End bp3482411 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID637827138 
Productprolyl 4-hydroxylase, alpha subunit 
Protein accessionYP_428106 
Protein GI83594354 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCGG CCCTCCCGAC AGCCGAGCCG CCGGCCGCAA GCGGTCTGCT CTTGCCTTAC 
CATACGCAGG CGGACTGGCT GCCGCCGGAC CTTGCCGACG CCTTGCTCGA CCATGCCATC 
GCCAACGAGG CCCGTTTTCA GCCGGGCTCG ATCATGCAAA GCGGCAGGCT CACGGTCGAT 
GAGACCATCC GGCAAGTTTC GGTGCTGGAG CATCTGGGGC CCTTCCAGGA GAGGGTGACG 
GAAGCCGCCC TGGCCGCCAA GCCCCTGCTC GAGACCCTGT TTGGCATACC GGCCTTCACC 
GCCAGCCGAG TCGAGATCGA ACTGGCCGCC CATGGCGACG GGGCCCATTT CCAACAGCAT 
ATCGATACCT TCGTGGTGGT GAACAAGCGC CCCAACCCCC GTATCCTGAC GCTGGTGCTG 
TATCTACACC GCCGGCCCCG GCGGTTCGCC GGCGGCGCCC TGCGTCTCCA CGCCCTGGGG 
GGCGCGGCGA TCCGCGACAT AGCGCCCGAT CACAACCTGC TCGCCGCCTT CCCGTCGTTC 
GCCCCGCATT CGGTGCAACG CCTGACATGT CCGGGGGGCG CCTTCGCCGA CCGGCGCTTC 
GCCGTAAACA TCTGGATCCA CCGCTAA
 
Protein sequence
MTSALPTAEP PAASGLLLPY HTQADWLPPD LADALLDHAI ANEARFQPGS IMQSGRLTVD 
ETIRQVSVLE HLGPFQERVT EAALAAKPLL ETLFGIPAFT ASRVEIELAA HGDGAHFQQH 
IDTFVVVNKR PNPRILTLVL YLHRRPRRFA GGALRLHALG GAAIRDIAPD HNLLAAFPSF 
APHSVQRLTC PGGAFADRRF AVNIWIHR