| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2659 |
|---|
| Symbol | |
|---|
| ID | 4625280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3262187 |
|---|
| End bp | 3263086 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639797786 |
|---|
| Product | prolyl 4-hydroxylase, alpha subunit |
|---|
| Protein accession | YP_943972 |
|---|
| Protein GI | 119946292 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3751] Predicted proline hydroxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00638484 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00126979 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAG CAACTAAAAA TACCTATCAA AAGCTATCAC AGTTAAGTAG TTCTCAACTC
AACTTAGGGT TATTAGCTGG ATTAGAAGTA AAGCTCAGTA AAGTGCCTAA CGATCTTGAT
TTGTTAAGAT TACAATTAGA ACTTTTAAAA AAAGCAGGAT TGCTTAATGA AGCGTTTGCT
ACTCAGCAAA AGCTTGCTAG CTTATCTGGT CACTTTATTA GTGATGACAT GATTAAAGCA
GCTCAAAAAC TATCTTCCGT TACTAAATAC TTTAATGTAG ATGAAATTAA ACCGAATAAC
TTCTCAAATA CTCCTCTCGT AGTGATTGAT GATTTTCTAT CACCCGCTTT CTTATCTGAT
TTATTATCTC ATACGCTTGA GAATGAAAAT AAATTTCGCA TGGCGAATGT AGGTTCAGAT
AATCCGTATT ACGTTCCGGA TAAACGTTTA ACTCATGTTT CTTTTGAGCT TGGGGAATTT
AAAGCACACT TTCTTGACTT TGTAGGGAAT AATCTTAATC ACTTCAAAAC ATTATTAAAT
ATTCCTGATT TTAATTACGC TAAAAGTGAA ATTAAATTAA CGAATCATTT AAATGGGGGG
TTTTTTCAGC CACATGCTGA TAATAAAGCA ATGTTTGGCG ATACTAAACG CGTGATTTCT
TGGCTTTATT ATTATCATCA AGTGCCTAAA GCATTTAAAG GTGGTGAACT ACTGGCTTTT
GATAGCAACA TTCAACAACA AGAGTATTAC ACGCATAAGT TTACAAAAAT AGAACCTATC
AATAATCGTT TTGTAGCATT TCCAAGCTGT TTTTATCATG CGGTAACACC AACGTTGTTA
GCGGATAATC AATTTTCTAA TGGGCGTATG GCTGTTGCTG GCCATATTCG TTTTGAGTAG
|
|---|
| Protein sequence | MEEATKNTYQ KLSQLSSSQL NLGLLAGLEV KLSKVPNDLD LLRLQLELLK KAGLLNEAFA
TQQKLASLSG HFISDDMIKA AQKLSSVTKY FNVDEIKPNN FSNTPLVVID DFLSPAFLSD
LLSHTLENEN KFRMANVGSD NPYYVPDKRL THVSFELGEF KAHFLDFVGN NLNHFKTLLN
IPDFNYAKSE IKLTNHLNGG FFQPHADNKA MFGDTKRVIS WLYYYHQVPK AFKGGELLAF
DSNIQQQEYY THKFTKIEPI NNRFVAFPSC FYHAVTPTLL ADNQFSNGRM AVAGHIRFE
|
|---|
| |