10 homologs were found in PanDaTox collection
for query gene Cpin_5445 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_5445  hypothetical protein  100 
 
 		 415 aa  840    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.262765  normal  0.835503 
 
 
-
 
NC_002950  PG1385  TPR domain-containing protein  25.26 
 
 		 400 aa  89  1e-16  Porphyromonas gingivalis W83  Bacteria  n/a    hitchhiker  0.00692083 
 
 
-
 
NC_013061  Phep_2164  Tetratricopeptide domain protein  23.94 
 
 		 358 aa  71.2  0.00000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.498556  normal  0.621045 
 
 
-
 
NC_013501  Rmar_0990  Tetratricopeptide TPR_2 repeat protein  24.15 
 
 		 410 aa  65.9  0.000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.113297  n/a   
 
 
-
 
NC_013037  Dfer_1030  TPR repeat-containing protein  26.12 
 
 		 486 aa  60.5  0.00000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.0990099 
 
 
-
 
NC_008255  CHU_1681  hypothetical protein  23.99 
 
 		 371 aa  55.1  0.000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.070377  normal  1 
 
 
-
 
NC_013061  Phep_2165  TPR repeat-containing protein  23.24 
 
 		 382 aa  50.8  0.00004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0208318  normal  0.644688 
 
 
-
 
NC_010830  Aasi_0827  hypothetical protein  21.41 
 
 		 394 aa  50.1  0.00007  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.748424 
 
 
-
 
NC_011146  Gbem_2515  Tetratricopeptide TPR_2 repeat protein  25.99 
 
 		 265 aa  43.9  0.005  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000326196  n/a   
 
 
-
 
NC_012918  GM21_1704  TPR repeat-containing protein  25.99 
 
 		 265 aa  43.9  0.005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.12979e-21 
 
 
-
 
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