Gene Gbem_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2515 
Symbol 
ID6782512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2915268 
End bp2916065 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID642768510 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002139319 
Protein GI197118892 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000326196 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACGA CTTTTGACGA GAAACTGGCA GACGGGATAG CCCTGATGGA GTCGGGAGAG 
TATGTCCAGG CCGTCGAAGC CTTCAAAGGG TGCATCTCGC TTGAGCCGGA GAACGCCGAG
GGTTATTTCT ACTTGGGCGA GGCGTACTCG GAGCAGGGGA AGGCCGACGA TGCCATCGCT
GCGCTCAAGA AGGGGCTGGA GCTTGCGCCT GAAGACCTCG ACGGGATCAC GGCCCTGGGC
GACGTTTATT TCGAATCGGG CAAGCACAAG GATGCGCTCG GCTGTTACCG CAAGGTGACC
GAGCTGCAGC CCAAGGAGTG CGACGGCTAC GTCAGCATGG GCCTTGTGTA CAACGCGATG
GAACGGACCG AAGATGCGCT GAAGTCCTTC CAGAAGGCGC TTGAACTCGA TCCCAAAAAC
GTCTTCGCCC TGAACGCCAT GGGGGACCTT TATTACGGTC TCGGGGAGAA TGAGAAGGCG
ATCGAGGCCT ACCACAAGGG AATCGAGATC GATCCCGCTG ACGCCACCGC CCGCTTCAAC
TTGGGGGAGC TCTACTACGA CATGGACGAC CTCGAGTCGG CCGAGCGCGA GACGCTGGAA
GCGGTCCGCC TCGACCCCGA TTTCACCATG AGCTATCTTA CGCTGGGAAA CATCTGCATC
GACCAGGACC GCACCCAGGA GGCGATCAAG TACTTCGAGA GCTACCTGGC CAGGGAACAC
TCCCCGCAGG CCCGCGAGAT GATCGCCGAG GTGAAGGCTG TGGTGGAAGG GTTGAAGGAA
GAGATGCGCG GGCAATAG
 
Protein sequence
MGTTFDEKLA DGIALMESGE YVQAVEAFKG CISLEPENAE GYFYLGEAYS EQGKADDAIA 
ALKKGLELAP EDLDGITALG DVYFESGKHK DALGCYRKVT ELQPKECDGY VSMGLVYNAM
ERTEDALKSF QKALELDPKN VFALNAMGDL YYGLGENEKA IEAYHKGIEI DPADATARFN
LGELYYDMDD LESAERETLE AVRLDPDFTM SYLTLGNICI DQDRTQEAIK YFESYLAREH
SPQAREMIAE VKAVVEGLKE EMRGQ