Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2515 |
Symbol | |
ID | 6782512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2915268 |
End bp | 2916065 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642768510 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002139319 |
Protein GI | 197118892 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000326196 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAACGA CTTTTGACGA GAAACTGGCA GACGGGATAG CCCTGATGGA GTCGGGAGAG TATGTCCAGG CCGTCGAAGC CTTCAAAGGG TGCATCTCGC TTGAGCCGGA GAACGCCGAG GGTTATTTCT ACTTGGGCGA GGCGTACTCG GAGCAGGGGA AGGCCGACGA TGCCATCGCT GCGCTCAAGA AGGGGCTGGA GCTTGCGCCT GAAGACCTCG ACGGGATCAC GGCCCTGGGC GACGTTTATT TCGAATCGGG CAAGCACAAG GATGCGCTCG GCTGTTACCG CAAGGTGACC GAGCTGCAGC CCAAGGAGTG CGACGGCTAC GTCAGCATGG GCCTTGTGTA CAACGCGATG GAACGGACCG AAGATGCGCT GAAGTCCTTC CAGAAGGCGC TTGAACTCGA TCCCAAAAAC GTCTTCGCCC TGAACGCCAT GGGGGACCTT TATTACGGTC TCGGGGAGAA TGAGAAGGCG ATCGAGGCCT ACCACAAGGG AATCGAGATC GATCCCGCTG ACGCCACCGC CCGCTTCAAC TTGGGGGAGC TCTACTACGA CATGGACGAC CTCGAGTCGG CCGAGCGCGA GACGCTGGAA GCGGTCCGCC TCGACCCCGA TTTCACCATG AGCTATCTTA CGCTGGGAAA CATCTGCATC GACCAGGACC GCACCCAGGA GGCGATCAAG TACTTCGAGA GCTACCTGGC CAGGGAACAC TCCCCGCAGG CCCGCGAGAT GATCGCCGAG GTGAAGGCTG TGGTGGAAGG GTTGAAGGAA GAGATGCGCG GGCAATAG
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Protein sequence | MGTTFDEKLA DGIALMESGE YVQAVEAFKG CISLEPENAE GYFYLGEAYS EQGKADDAIA ALKKGLELAP EDLDGITALG DVYFESGKHK DALGCYRKVT ELQPKECDGY VSMGLVYNAM ERTEDALKSF QKALELDPKN VFALNAMGDL YYGLGENEKA IEAYHKGIEI DPADATARFN LGELYYDMDD LESAERETLE AVRLDPDFTM SYLTLGNICI DQDRTQEAIK YFESYLAREH SPQAREMIAE VKAVVEGLKE EMRGQ
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