| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2164 |
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| Symbol | |
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| ID | 8253270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2488208 |
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| End bp | 2489284 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644935813 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_003092430 |
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| Protein GI | 255532058 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.498556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.621045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG TACTTTTAGG TATATTGTTT GTAGGTGTTA CCTCATATGC AAACGCTCAG
AAAAGTGAAA TTAATGAGGC CAAGAAAGCA TGGAATCTTT TGGCTGTAAC CTCAGGGAAA
ACTCTGGCCG ACCATTTAAA GGTATTGAAT GGTGGATTAG CGCATACGGA CAAAGCTATT
GCCGATGAAA AATCTAAAAA TTTACCAGAT GCGTGGTCAT ATAGGGCCTT GTTTGCATCA
AGGATTGCTT TAGTGGATTC AGTTGACCAG AACAATGCCA AAGCCAACCA GAAGATTGCT
GAAGAAGCAA TTGCCAAAGC AAAATCCTTA GATGAAAAAG GGACAGAAAA AGAGAACATT
GAAACAGCAA GTGTAAACGT AGAGAATGCA CTCAGGAACA GGGCAATTTA TGCTTTTAAC
AAAAAGAATT TTGCCGGGGC CCTGGAAGCC TTTAATGAGA TCACTGCTAA GAGTCCGAAC
GACACTACTA TGTATGTAAA TGCCGGTGTA ACTGCAAAAG AACTGCAGAA TTATCCCGAG
GTAGTTAAGA ATTTTAAAAA GGCAATAGAC CTGAACTATA AAGATTCAAA AATATTGTAC
TCTGAAATTG TAAGCATCAC CTTCGAAAAA ATGAAGGACA GTGTTGCCGG ACTAAACCTT
TTAAAAGAGG CTTCTGCAAA ATATCCTGAC GATTCTTATT TTATTGGAAT GGAGACAGAT
CTTTACATTA AAAAAGGTGA CATTGCAAAA TCTCAGGAAA TGCTGCAAAA GCTGATTGCC
AAAGATCCTA AAAATGCAAT CTATCAATAT TTAATGGGCG ACACCTATTA TAAACAGGCA
TTGGAGATCC AGACTAAAAG AAATGCTTTA GATGTTAAAA AAACTAAAGA ATTTAATGAA
ATGGGTGCTA AGATGACCAA GCTGATCGAT CAGTCGGTTC CTTATTATAA AGCCGCTTTA
GAGTTAGATC CTAAAAATGT TAATGCATTG GAAAACCTGA AAATCATCTA TCTTTTTAAA
GATGATAAGG TAAACTATGA AGTAGTCAAT AAAAAACTCG CCGAGTTAAA GAAATAA
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| Protein sequence | MKKVLLGILF VGVTSYANAQ KSEINEAKKA WNLLAVTSGK TLADHLKVLN GGLAHTDKAI
ADEKSKNLPD AWSYRALFAS RIALVDSVDQ NNAKANQKIA EEAIAKAKSL DEKGTEKENI
ETASVNVENA LRNRAIYAFN KKNFAGALEA FNEITAKSPN DTTMYVNAGV TAKELQNYPE
VVKNFKKAID LNYKDSKILY SEIVSITFEK MKDSVAGLNL LKEASAKYPD DSYFIGMETD
LYIKKGDIAK SQEMLQKLIA KDPKNAIYQY LMGDTYYKQA LEIQTKRNAL DVKKTKEFNE
MGAKMTKLID QSVPYYKAAL ELDPKNVNAL ENLKIIYLFK DDKVNYEVVN KKLAELKK
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