| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1030 |
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| Symbol | |
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| ID | 8224600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1211254 |
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| End bp | 1212714 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644928891 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003085444 |
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| Protein GI | 255034823 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0990099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGTTTTTAAT TTCTGCACTT AGTCTGTTCG GCTGTGCTGC GATGGCGCAG
GACGATGCTG TGAACAAGGC TATGGTAGAT GGATTGCGTA AGGACAAAGA GAAAAGCGAT
AAAGATGTAA GCGATCCGAA GGCGAGTGCG AAAGCTTCTT TCTGGATGGA GCGCGCAAAA
CTTTATGAAA ACATAGCTTT GCAAGGTTCC GAAGTAGATT CCAGTGCAGC AAAAACGGCG
TTGGAAGCTT ATAAAAAGGT TGTGGAGCTG GATGTTACAA AAAAAGGGGA GCCAGGTAAA
TCTTCGAAAG AAGCGTCCAA TGTTTTGGCC GGCGGAGAAG GGACACAGCT TTTCAATGCA
TTTGTAAAGC AAGGTGCTGA AAAATACCAG GCGAAAAACC TGGGCGGTGC GCTCGAAATG
TTCAAGGCTG CACAGGAGAT CAATAAAAAG GATACCCTGG CTGCACTTTA CGGCGGTATC
GCTGCACAAC AGCTTGACCA AAAGGACGAT GCGAAAGCTT CTTTCGAGAA ATATACTGCT
AACGGCGGTA AAGACCCCAG CGTTTTCTAC GGTCTGGCTC AGCTATATCG CTCAGAAAAC
AACTTCGACA AAGCGATCGA AACACTGAAC CAGGGTTTGG CACAATCGCC AGGCAACAAA
GACCTGAAAG CAGAGATCGT GAACATTTTG CTTGCATCTG GCAAGGAAGA CCAGGCTATC
AAAGAACTCG AAGCACTGGC AGCAGCTGAT CCAAAAAACA CCCAGAATGT GGTAAATTTG
GCTATTTTGT ACGATAACAT GTACAGAACT GCTACTGACA AGGTGAAACA ACTGAGCGCG
AAAGCAGGTG CTGGTGCCAA TGCAGCAGGA GCCGCTGAGA AAAACCTGGC AGGTGAAAAA
GACAAAATTG CCGTATACGA TGGTGAGGTG AAGCGTATCA GCGCGCTGAT CAAAAAGCAG
CCTAAAAATG CAGACTTGAA ACGCCAGCTT GCTGATGTAA CCGCGAAGAA AAAGGAGAGC
ACCGAAGCAG TAGCGAAACT GGAAGGCGAA GTGAAAGCCG CACAGGAAGC TGCCAAAGGT
CAGGATGTAG CAGGAGCTCA GAAAGAGCTG GAAGAAGCAA AAGCAAAACA GAAAGAAGCG
AGCGACAAAG CAGTAGCTAA CTATAAGAAA GCACTGGAAA TCGACGCGAC TAACTACGAT
GCGCTTTACA ACCTGGGCGT TTTCTACTTC AACGAAGCGG TACAGCTGAA AGGCGAAGTG
GATAACATGA ACATGACCGA ATACCAGCAA CGTGGTAAAG AAGTTGAAGG TCGTGTTTGT
GGTAAGTTCA AAAAAGCAAA ACCATACTTC GAAAAAGCAA TCCAGGCAAA GGACGAAGCT
GAGGCCAAAG ACAACCTCAC CAACCTGAAC GGCGTTCTGG AACAATTCGC TTCGAAGGGA
GTGGCTTGTA TTGAAGAATA A
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| Protein sequence | MKKLFLISAL SLFGCAAMAQ DDAVNKAMVD GLRKDKEKSD KDVSDPKASA KASFWMERAK
LYENIALQGS EVDSSAAKTA LEAYKKVVEL DVTKKGEPGK SSKEASNVLA GGEGTQLFNA
FVKQGAEKYQ AKNLGGALEM FKAAQEINKK DTLAALYGGI AAQQLDQKDD AKASFEKYTA
NGGKDPSVFY GLAQLYRSEN NFDKAIETLN QGLAQSPGNK DLKAEIVNIL LASGKEDQAI
KELEALAAAD PKNTQNVVNL AILYDNMYRT ATDKVKQLSA KAGAGANAAG AAEKNLAGEK
DKIAVYDGEV KRISALIKKQ PKNADLKRQL ADVTAKKKES TEAVAKLEGE VKAAQEAAKG
QDVAGAQKEL EEAKAKQKEA SDKAVANYKK ALEIDATNYD ALYNLGVFYF NEAVQLKGEV
DNMNMTEYQQ RGKEVEGRVC GKFKKAKPYF EKAIQAKDEA EAKDNLTNLN GVLEQFASKG
VACIEE
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