| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1681 |
|---|
| Symbol | |
|---|
| ID | 4186542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1969233 |
|---|
| End bp | 1970348 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638071675 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678291 |
|---|
| Protein GI | 110638082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.070377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTT TTCTCACGTT CTTTTTGATT GTTTTTTCTT ATGCATTACA GGCGCAGGTT
GCATCCTTAA CCAACGCCAT TTTGTACCGC AACGATGGTA ATCTTATAAA AGCCAAAGAA
GAAATTGACA AAGCTGTTGT CAATGAAAAA ACGATTGGCA TGCCGAAGAC CTGGTTTTAC
ACCGGTTTAA TCTATAAAGA TCTTTATCAG GCAACCCCCA CAGATCTTGC TGCACTTACA
ACGTCTACCG CTGCATTTAA AAAAGTATTT GAACTGGAAA AACCGGCAGG GGAGTTCAGT
AAAAAATCTC AGGAAGCATT GGAACAGATC TGGGCAATAT CCATCAATAA CGGTGTGAAT
TTATATCAGC TTGAAAATTA CCGTCAGGCT ATTACAGATT TTGAACGTGC GCAAGGCATT
AAGCCAGGCG ATACAACAGC GTATGTGTAT GCTTTTTATG CAGCCAATGA ACTGAAAGAT
CAGGCACTGT TAGAGAAATA TTCTTCCGCA TTGGTTCGGT TAAACTATGC CAGCGAAGCT
GTTTACTATA TTGATATTGA ATCGTTAATG GATAAAAATT TATTGGATAG TGCATACACG
GTTTCTAAAA AAGCATTAAC CAACTATCCA TCCGACATTG CATTAAAAAC ACAGCAAACC
GAATTGATGG TGAAGATGAA TAAAACACAG GAGGCAATCG AAAACCTGAA AGTGCTTTCA
ACTAAAAATC CAAAAGATGT ACAGCTGTTA ATTAATATCG GTTCGCAGTA TACCAATCTC
AATGATGAAC CACATGCGGC TGAATATTAT CAAAAGGCCT TAGCTATTGA TTCTGTGAAT
TTCAATGCGA ATTATAATAT GGCGGTTTTC AGTTTGCGCA AGGCTAATGA AATTTCAAAG
CAGATTGTGG TGAGTGACAA CAACCTTAAA AAATCATTTA AAGCAATACC AACTGTTGCA
ACAGATCCGC TTCGCCAGAA TCTTCAAAAG GAATTAGCCG TTTCTACTAA ATATTATAAC
CGTGCCGTGT TAGGTGCAAA AGATGAAGAA GCGAAGAAAA ATGTAAAAAC GCTTCAGGAT
AATATTACAT CTTTTGAAGA TCAGTTTTTG AAATAA
|
|---|
| Protein sequence | MSRFLTFFLI VFSYALQAQV ASLTNAILYR NDGNLIKAKE EIDKAVVNEK TIGMPKTWFY
TGLIYKDLYQ ATPTDLAALT TSTAAFKKVF ELEKPAGEFS KKSQEALEQI WAISINNGVN
LYQLENYRQA ITDFERAQGI KPGDTTAYVY AFYAANELKD QALLEKYSSA LVRLNYASEA
VYYIDIESLM DKNLLDSAYT VSKKALTNYP SDIALKTQQT ELMVKMNKTQ EAIENLKVLS
TKNPKDVQLL INIGSQYTNL NDEPHAAEYY QKALAIDSVN FNANYNMAVF SLRKANEISK
QIVVSDNNLK KSFKAIPTVA TDPLRQNLQK ELAVSTKYYN RAVLGAKDEE AKKNVKTLQD
NITSFEDQFL K
|
|---|
| |