10 homologs were found in PanDaTox collection
for query gene Cpin_5246 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_5246  Carbohydrate-binding family V/XII  100 
 
 
562 aa  1153    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.876485  hitchhiker  0.0000498819 
 
 
-
 
NC_011898  Ccel_1519  hypothetical protein  26.9 
 
 
1910 aa  57  0.0000009  Clostridium cellulolyticum H10  Bacteria  normal  0.387558  n/a   
 
 
-
 
NC_013730  Slin_0183  hypothetical protein  26.03 
 
 
1168 aa  54.3  0.000005  Spirosoma linguale DSM 74  Bacteria  normal  0.852248  normal 
 
 
-
 
NC_013037  Dfer_2529  hypothetical protein  29.81 
 
 
456 aa  53.5  0.00001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0585489  normal 
 
 
-
 
NC_007964  Nham_3850  complement C1q protein  29.46 
 
 
781 aa  52.8  0.00002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_3346  hypothetical protein  31.43 
 
 
650 aa  50.4  0.00008  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010830  Aasi_0556  hypothetical protein  53.85 
 
 
247 aa  47.8  0.0006  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    hitchhiker  0.00000000614693 
 
 
-
 
NC_013037  Dfer_3029  hypothetical protein  32.91 
 
 
323 aa  45.8  0.002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.735779 
 
 
-
 
NC_011094  SeSA_A0665  hypothetical protein  31.4 
 
 
378 aa  45.4  0.003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.000000719384 
 
 
-
 
NC_008009  Acid345_0352  hypothetical protein  26.26 
 
 
1037 aa  44.3  0.006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.197071  normal  0.320234 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>