| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3850 |
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| Symbol | |
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| ID | 4030185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4228762 |
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| End bp | 4231107 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637972239 |
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| Product | complement C1q protein |
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| Protein accession | YP_579013 |
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| Protein GI | 92119284 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCTC TGGCCCTTGT ATTCGTATTA GCCTTCAGTG TTATTGCCAG CGCAGCTCAT
GCGCAGGACT GGGGCAAGGT GGCGACGGTA TCGGCCACCA TGGGTGTGAG CGGCAGCCGG
TTGTGCCTGG GCGAGGCGTC CCGCGGCGAC ATCGGTTGCC CGGCCTACGC GCCGAGCGTG
ACCACGGCGG GCGACCTGGG CGTCAGCGGC ACGGTGACGG CCAACAAGTT TATCGGCGAC
GGCAGCGGGC TGCTGAACCT GTCGGCCAGC GGCGACCGGA TTGTGAGCGG CACGCTGAGC
ATGCTGGCGA TTTCCAATAC CGGCTACATC AGCCTGACCA CGGGCGCGAC CAACTGGGGC
TATTTGAGCA GCGGCGTGAA CTACCTGCCG AATCTTAAGA CGACGACGCT CTCCGCCACC
ACGGCTATCC AGGTGGGGAG CAACAGCCTC ACCTGCGGCA CCACCATTTC CGGCACCATG
CGCTACAGCG CCATCTCTTC CACCATGGAA TACTGCAACG GCAGCGCCTG GACCAGCATG
GGGCCGAGTG CCACCTCACC AGTAAGTTTC ATGGTGAAGC GGAGCGCCAA TCAAACGGTT
GCTTCCTACG TGGAGACAAA GATTCAGTTC GACCAGGAAG TGTTCGATAC AAATAACAAC
TTCAATACAT CTACCAACCG TTTCACACCG ACCGTGCCCG GAAAATACCT CATCACTCTC
TCCACCTACT GCGCCGATGC GACGACGCAA TGTAATGCCT TGATTTATAA AAATAGCAGT
TCAGCATATG CATCGTTTGC CTACACTGGC ACCACAGCTC CCCAGGCCAC GGCCATCATT
GATATGAATG GAACGACCGA TTACCTGGAA GGGTATGTCT ATAACGGGGG CGGAACCACT
CTAGCTGGCG GAGCGACTGG TAATCACTAC ACGTATTTTG ACGGAGTTCT ACTCGCGCCC
CAAGGTGGCG GCAGCGGCGG CACGGCCACA CCGGCGGGCA GCACCGATGA TGTCCAATAT
GCCAGCGGTG GCGCCTTGGC GGCCGATACG GGCAAGTTCA CCTACGCTGG CGGGCTTCTG
TCGGCGCCGA ACATTTCCAC CACCAACATT TCGCTCAGCA CCATCAACGG CGTTCTCTTT
ACCGGCGGGG CCAGCGGCGA CCGCATCGTG AGCGGCACGC TCAGCATGCT GGCGATTTCC
AGTACCGGCT ACATCAGCCT GACCACGGGC GCGACCAACT GGGGTTACCT GAGCAGCCTT
GCGAGCTTCA TTCCGGTGCT AGGCGCGAAC ACGATCAGCA GCACCAACAT CAGTGTTACG
CTTAGCCACT ATACGCCACG TGCGATTACG TCGTTTGCGG GCGCCGGCGG CAACTACATC
GTCAGTAGCA CGTCGAGCGT GTCGGCCAGC AGCGCGGGCA GCGTGAAAAT CGCCGCCGGT
GGCAAGCTGG CCATGACTAT TGTGTCGAGC GGCAACGTGG GGATTGGGAC AACTGCGCCG
AGCACTCCGC TAACGTTAGG AAACGCAAAG GCGCTGGGTT TTAACAGTAC AACGGGCTAC
AACAGCGGCT CGCTTGGTGC GGCCATATAT AAGTGGACTG ATAACAGTCT TTTTATCGAC
AACTTTGACG GAAGTGTTGT CTTCCGGCGC GCTTCATTTC TGCCCTCGAT GGTTATTGAC
CCTTCTGGCA ACGTGGGGAT TGGGACGACG GCACCAGCAA AAACTTTGGA TGTTAACGGC
GGGGCTAGCA TTGGCACTAC TGCAGGTTCC CGGGTTCAGC TTGGCACTAA CGGCAGCGTC
AATTTCATTC AATCCATCAC AACTGGGAAT GCGGCGTTTC CATTGAGTTT TTACCAAGGG
CCGGGTGAGG CCATGCGCAT TGATACAAAC GGCAACGTGG GGATTGGGAC AACAGCCCCC
TCGTATATGC TGCACGTCAA TGGTTCGGTT GCCGGGGTAG GCGCCTACAA TGCGCTTTCC
GACCGCCGAT TTAAGAAGAA TATCCATCCC GCCGATTACG GGTTGGCAGC GATTGAGAAG
CTGCGCCCGG TCACGTTTGA CTGGATAAGC CCGACCAGCC CGCAATTGCA TAACCGTCAG
TTGGGCCTGA TTGCGCAAGA GGTGCAGCCC CTGGTGCCCG AGGCGGTGAG TGTCGCTAAC
GACCCCTCGC ATACCATGAG TATTGCCTAC AGCACGCTGG TGCCGGTGCT CATCAAGGCC
GTGCAGGAGC TCAAAGCCGA CAACGACAAT TTGCGAGCAG AGCTGCGCAC GGTGAGGGAC
ACCGACCACG CCGCGATTGA ATCTCTCCAG CGTCAGCTCA ACGAGTTGAG GGCCGCGAAA
CGCTAG
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| Protein sequence | MRPLALVFVL AFSVIASAAH AQDWGKVATV SATMGVSGSR LCLGEASRGD IGCPAYAPSV
TTAGDLGVSG TVTANKFIGD GSGLLNLSAS GDRIVSGTLS MLAISNTGYI SLTTGATNWG
YLSSGVNYLP NLKTTTLSAT TAIQVGSNSL TCGTTISGTM RYSAISSTME YCNGSAWTSM
GPSATSPVSF MVKRSANQTV ASYVETKIQF DQEVFDTNNN FNTSTNRFTP TVPGKYLITL
STYCADATTQ CNALIYKNSS SAYASFAYTG TTAPQATAII DMNGTTDYLE GYVYNGGGTT
LAGGATGNHY TYFDGVLLAP QGGGSGGTAT PAGSTDDVQY ASGGALAADT GKFTYAGGLL
SAPNISTTNI SLSTINGVLF TGGASGDRIV SGTLSMLAIS STGYISLTTG ATNWGYLSSL
ASFIPVLGAN TISSTNISVT LSHYTPRAIT SFAGAGGNYI VSSTSSVSAS SAGSVKIAAG
GKLAMTIVSS GNVGIGTTAP STPLTLGNAK ALGFNSTTGY NSGSLGAAIY KWTDNSLFID
NFDGSVVFRR ASFLPSMVID PSGNVGIGTT APAKTLDVNG GASIGTTAGS RVQLGTNGSV
NFIQSITTGN AAFPLSFYQG PGEAMRIDTN GNVGIGTTAP SYMLHVNGSV AGVGAYNALS
DRRFKKNIHP ADYGLAAIEK LRPVTFDWIS PTSPQLHNRQ LGLIAQEVQP LVPEAVSVAN
DPSHTMSIAY STLVPVLIKA VQELKADNDN LRAELRTVRD TDHAAIESLQ RQLNELRAAK
R
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