| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5246 |
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| Symbol | |
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| ID | 8361423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6642204 |
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| End bp | 6643892 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967394 |
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| Product | Carbohydrate-binding family V/XII |
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| Protein accession | YP_003124878 |
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| Protein GI | 256424225 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.876485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000498819 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTATAA CAACCAGAGC AGCGCTGAAA GCACAATTTA AGACCGGCGC TATACCCACC
TCGCAGGATT TCTTCAACCT GATAGACTCA ACGCTGGTGA GAAGGGATGA TGCTTTTTTC
GGCAAGTGGG CAGCTGGGAC CTGCTACTAC GAAGGCGATG TAGTGATCTA CAATAATGCA
TTATACACCT GTGTACCAGC CGGCGATAAA CCCTGCGGCT GTGAAGGAAA AGAAGGAGAT
ACCAAGGCAG ACAAGTCGAA AGGACATTGC TCCGTGGACA ATCCTGAGAT TGATTGTACA
AACTGGAAAA TGCTGGATAT CGATGCTTCT GATGAAGATT GGGAGATCGT CCGCAATGAA
GATAAAGTAC CGGTTATCAT GTACGCGAAA GTATTTGGTA AGATCGGTAT GGGTACAGAA
GATCCCAAAG CGCGTGTGCA CATTCATGCA GACGAGGTGA AAGGAGATTT TCTGTTTAGT
CCGGATAATG CACAGACCCC TGAGTTTGTG ATCCAGCAGA CAGGAGGCGA AGCGCCAACG
CAATCCCTGT CTGAAAAGAT AGCAGACAAC AAAGCTGTTT TTACAACGAA TACAGACGGT
TTCCTGTTTA CAACCACGGT GCCTCCGGTG CCAGTAGAAG GAGAGGAGAA TGTACCGAAG
GAAGCAGCCG CGGTGAAGCC GGTGTTTATC ACCACACCAG ATGCCGGTGC GGCAGTAGGT
ATCGGTACAA CAGTGCCGGA AGGTGCTGTT GATATCCAGA ACCAGCCGGC AGCCAGACTG
ATACTGAATC CGGTACAATC AGTCGTACCA CAGGCGGTAT GGTTGCACAA AGGTGAATAT
GGTCAGCAGA GTTATCTGAA CACCGCGCTG GATGGTATCG CTGCTACTTT CACCACGAAT
GCGGCAGAAG GCTTTTATTT CCGTAAAGGA CTGGAAGATG GTAAGAACTA TCTGAAGAAT
ATTGCCAAAC CTGCGACGGA GACCTTAGTG TCTATCAAAC AGGATGGCCG TGTAGGGATC
GGTACTGAAT CGCCGGTCAC CAATGTAGAG ATCACCAAAG AGAACAGTGC CGGCGCATTC
CTGCTGTGTC TCGACAACAC CAATCCTGGT TTCAGTATCA TCAATAACCG TCCTAACAAC
GAGAAGAGAA ATTATCTGTT GCTGGGCGCT GATAACGACT GGGGGGCTTT CCTGACGGAT
GCTTCCAAAG GTTTTGTATT CAAGAGAGGT GGTGAATATG GTAATGGCAA CGAGCTTGAG
ATCAATCAGG GCGATGACCT GGTGACGATC TCCAACGAAG GTAAAACCAT CATAGGTGGT
TTGACTGCAC AGGGTTTTGA TCTGAATGTA AAAGGTAAAG CCAGAAGTTT TGGCTTGTAC
CTGGATACTG ATGTCCGCAA GGTGACAAAT CAGGCGAAAC TGGGCAGTGT GATCGATAAG
GTAAAGCGAC TGAATCCTAT CACTTTCAAC TTCAACCAGA AGGCGAATTG TCCTTCCAAT
GAATCACAGA TCGGTTTCCT GCCACACCAG GTTGAGGAGT TCTTCCCGGA ACTGGTGAAT
ACGGACGGCG ATGGTACACA GACCCTGGCA TATGCCAATA TGGTTGCTGT GCTGACCAAA
GCGATACAGG AACAGCAGGA TACGATTGCT GCCCTGCAAA AGCGCCTGGA TGCCCTGGAA
GGCAAATAA
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| Protein sequence | MSITTRAALK AQFKTGAIPT SQDFFNLIDS TLVRRDDAFF GKWAAGTCYY EGDVVIYNNA
LYTCVPAGDK PCGCEGKEGD TKADKSKGHC SVDNPEIDCT NWKMLDIDAS DEDWEIVRNE
DKVPVIMYAK VFGKIGMGTE DPKARVHIHA DEVKGDFLFS PDNAQTPEFV IQQTGGEAPT
QSLSEKIADN KAVFTTNTDG FLFTTTVPPV PVEGEENVPK EAAAVKPVFI TTPDAGAAVG
IGTTVPEGAV DIQNQPAARL ILNPVQSVVP QAVWLHKGEY GQQSYLNTAL DGIAATFTTN
AAEGFYFRKG LEDGKNYLKN IAKPATETLV SIKQDGRVGI GTESPVTNVE ITKENSAGAF
LLCLDNTNPG FSIINNRPNN EKRNYLLLGA DNDWGAFLTD ASKGFVFKRG GEYGNGNELE
INQGDDLVTI SNEGKTIIGG LTAQGFDLNV KGKARSFGLY LDTDVRKVTN QAKLGSVIDK
VKRLNPITFN FNQKANCPSN ESQIGFLPHQ VEEFFPELVN TDGDGTQTLA YANMVAVLTK
AIQEQQDTIA ALQKRLDALE GK
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