Gene Dfer_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3346 
Symbol 
ID8226924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4093776 
End bp4095728 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content53% 
IMG OID644931177 
Producthypothetical protein 
Protein accessionYP_003087722 
Protein GI255037101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATT TTCTGGCTAG TATCTGTCTC CTCTTGTACC ATCTTCCCTG CACGGCCCAA 
TCGCCGCAGA AGTTCAGTTT TCAGGGAATC GCCCGAAGCA TCGACGGGAA AACTGTAAGC
AATGCAGTTG TCGGAATACG AATTTCCATT CGCTCAGCAT CGCCCGCCGG AGAGATCGTG
TACCAGGAGA CCCAGGCGCC GTTGACAGGC TACGACGGGA TTTTCAATAT CAAGATCGGT
GAAGGTAACG GCATCGTAGG CAATGTGGGA GCAATTCTAT GGAAGAAGCA TGCCCACTAT
CTTCAACTGG AAATGGATGT GTCCGGCGGG GCCAGCTACA TTGATTTGGG GACAACGCAG
CTCCTGAGCG TACCATATGC CCTGCATTCA GAACAGGCAG CGAAATGGTC GGACGGATAT
CCCGTAGTTC AAAAGAACGA TGTTTTAGTA CCAGGCGATC CTGACATCGC AAAACATCGT
CTCCCCACGG TAGGCGCCGG TTCGCGGCTG ATCTGGTATC CTAAAAAAGC CGCATTCAGG
GCCGGAATTG TCGGGAACGG CGCCTGGGAA GATGCGCAGA TCGGCGATTT CTCGGCAGCC
TTCGGAACTA ACACCCTCGC TTCCGGAGCA AACAGCGCGG CCTTTGGAAC AGCTTCGTTA
TCGACAACCG CGAATTCGTT CGCCACCGGA AACGAAACAA GCGCTTCCGG CTGGGCCAGC
GCTACTTTCG GTAGCCACAC CGCAGCGAAA GCTAACGGAT CTTTCACAGC CGGGTTTTTC
AACGACAACA CCGATAACCC ACACCCAGCC TTGCTTGACC CCGCCGACCG GATTTTCCAG
ATCGGTAACG GCGATAACAA TGCACGCAAG AATGCAGTTA CCGTTTTAAG GAATGGCAAC
ATTGGTTTCG GCAGTGTCGC AACCAGTCCA ACACACATCC TCGACGTCGG AGGGAGGCTG
CGGATCAGAC ATAAGGACGC CACGGCAGGG TTGTTCTTCG ATAACTCGTC GGCGGTTCCT
ACTGGCTTTG TGGGTATGAT TACAGACGAT AACGTTGGAT TTTATCTCGG AAAGTGGCGC
TGGCAGGTGC ATTCAAACGG CGCGGTTGCT ACGGGAGGCG GGAATGCCAT CGGCGATGAA
TCGGTGGCGC TGGGGCCGGG GACAACCGCC AAAGCGTATG GCGCTGTCAC GATTGGCGCA
TTTAATAATG TCCAGGACAA TTCGGTAGGC AATTACGCGG GGGCCAAAAC CTCGGACCGG
ATTTTTCAAA TAGGTAATGG AATGGGAAAT CAGGCCCTTT CCAATGCCCT CACCGTTCAA
AGGAACGGGA ATGTCGGGAT AGGCAACAAT GCCTTGTTTC CAACCCACAT TCTGGAAGTA
GGCGGCCGCG CGCGTATCCA TCACAACGGG AGCACGGCGG GCATTCATTT CGATAATTCC
CAACACCAGG TCGACGGCTT CGTGGGAATG AAAACGGATG ATCAGGTAGG GCTTTATCTC
GGCAATTCCT GGATGTTCTG GGTTGATAAT GGCGGAACCG GATATATCAA CAATGCCATC
GTGCAGACAT CCGACCGCCG CCTCAAACGC GATTTCGTGC CGCTGTCATC AAGCCTCGGC
AAATTGACCA GCCTCAACGG ATACCATTAT TTCTGGAAGG ACAAGGAACG TGACCCATCA
TTGCAAACCG GACTCATCGC GCAGGAAGTG GAGAAACTGT TCCCTGAATT GGTCAAAACA
GACAGTAAGG GCTTCAAATC GCTGAACTAC ACCGGATTAA TCCCGCATTT GATCGAGGCG
GTGAAGTCAT TGAAATCGCA CAACGAAGCC CTGGCAATTT CAAATGCAAA TTTACAGAAG
CGTTTACGGC GGATCGAGGA TGTATTGCAG GCGACGCCCC GCAGAAGCAA GGACAGCCAG
CACCGGGCAG AAACCGGAGA CGAGATTTTC TAA
 
Protein sequence
MRNFLASICL LLYHLPCTAQ SPQKFSFQGI ARSIDGKTVS NAVVGIRISI RSASPAGEIV 
YQETQAPLTG YDGIFNIKIG EGNGIVGNVG AILWKKHAHY LQLEMDVSGG ASYIDLGTTQ
LLSVPYALHS EQAAKWSDGY PVVQKNDVLV PGDPDIAKHR LPTVGAGSRL IWYPKKAAFR
AGIVGNGAWE DAQIGDFSAA FGTNTLASGA NSAAFGTASL STTANSFATG NETSASGWAS
ATFGSHTAAK ANGSFTAGFF NDNTDNPHPA LLDPADRIFQ IGNGDNNARK NAVTVLRNGN
IGFGSVATSP THILDVGGRL RIRHKDATAG LFFDNSSAVP TGFVGMITDD NVGFYLGKWR
WQVHSNGAVA TGGGNAIGDE SVALGPGTTA KAYGAVTIGA FNNVQDNSVG NYAGAKTSDR
IFQIGNGMGN QALSNALTVQ RNGNVGIGNN ALFPTHILEV GGRARIHHNG STAGIHFDNS
QHQVDGFVGM KTDDQVGLYL GNSWMFWVDN GGTGYINNAI VQTSDRRLKR DFVPLSSSLG
KLTSLNGYHY FWKDKERDPS LQTGLIAQEV EKLFPELVKT DSKGFKSLNY TGLIPHLIEA
VKSLKSHNEA LAISNANLQK RLRRIEDVLQ ATPRRSKDSQ HRAETGDEIF