10 homologs were found in PanDaTox collection
for query gene Cpin_1808 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_1808  Xylose isomerase domain protein TIM barrel  100 
 
 		 299 aa  615  1e-175  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.011927  normal  1 
 
 
-
 
NC_013061  Phep_2777  Xylose isomerase domain protein TIM barrel  65.53 
 
 		 295 aa  396  1e-109  Pedobacter heparinus DSM 2366  Bacteria  normal  0.5665  normal  1 
 
 
-
 
NC_013037  Dfer_2147  Xylose isomerase domain protein TIM barrel  67.92 
 
 		 281 aa  383  1e-105  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.634392  normal  0.651305 
 
 
-
 
NC_009441  Fjoh_4077  xylose isomerase domain-containing protein  59.62 
 
 		 300 aa  335  7.999999999999999e-91  Flavobacterium johnsoniae UW101  Bacteria  normal  0.768567  n/a   
 
 
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NC_013730  Slin_5488  Xylose isomerase domain protein TIM barrel  32.92 
 
 		 285 aa  146  5e-34  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.479008 
 
 
-
 
NC_013037  Dfer_3708  Xylose isomerase domain protein TIM barrel  28.52 
 
 		 286 aa  130  3e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_0323  Xylose isomerase domain protein TIM barrel  21.88 
 
 		 536 aa  58.9  0.0000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
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NC_008009  Acid345_2848  xylose isomerase-like TIM barrel  23.53 
 
 		 282 aa  45.8  0.001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.561386  normal  1 
 
 
-
 
NC_009012  Cthe_0234  AMP-dependent synthetase and ligase  24.05 
 
 		 843 aa  43.1  0.006  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000591284  n/a   
 
 
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NC_008010  Dgeo_2613  hydroxypyruvate isomerase  24.8 
 
 		 267 aa  42.4  0.009  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
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