43 homologs were found in PanDaTox collection
for query gene Bphyt_2240 on replicon NC_010681
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010681  Bphyt_2240  putative acyl-CoA dehydrogenase-related protein  100 
 
 
392 aa  775    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2027  putative acyl-CoA dehydrogenase-related protein  82.39 
 
 
335 aa  510  1e-143  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5416  putative acyl-CoA dehydrogenase-related protein  57.23 
 
 
388 aa  344  2e-93  Burkholderia phymatum STM815  Bacteria  normal  normal  0.699876 
 
 
-
 
NC_007492  Pfl01_2543  hypothetical protein  55.15 
 
 
332 aa  332  6e-90  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.730703 
 
 
-
 
NC_004578  PSPTO_3131  hypothetical protein  51.98 
 
 
337 aa  318  1e-85  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470644  n/a   
 
 
-
 
NC_007005  Psyr_2998  hypothetical protein  52.28 
 
 
337 aa  315  9.999999999999999e-85  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3259  acyl-CoA dehydrogenase-related protein  52.24 
 
 
347 aa  310  2e-83  Pseudomonas putida KT2440  Bacteria  normal  0.543921  normal 
 
 
-
 
NC_009512  Pput_2502  hypothetical protein  51.94 
 
 
347 aa  310  2.9999999999999997e-83  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2636  acyl-CoA dehydrogenase  55.15 
 
 
347 aa  308  1.0000000000000001e-82  Pseudomonas putida GB-1  Bacteria  normal  0.292935  normal  0.528602 
 
 
-
 
NC_010002  Daci_5871  putative acyl-CoA dehydrogenase-related protein  54.1 
 
 
363 aa  306  5.0000000000000004e-82  Delftia acidovorans SPH-1  Bacteria  normal  0.845489  normal  0.406047 
 
 
-
 
NC_010501  PputW619_2652  acyl-CoA dehydrogenase  53.92 
 
 
347 aa  296  4e-79  Pseudomonas putida W619  Bacteria  normal  0.530272  normal  0.685897 
 
 
-
 
NC_007348  Reut_B4937  acyl-CoA dehydrogenase-related protein  53.11 
 
 
334 aa  290  3e-77  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1801  putative acyl-CoA dehydrogenase-related protein  40.06 
 
 
362 aa  220  3.9999999999999997e-56  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.162926 
 
 
-
 
NC_013441  Gbro_0202  hypothetical protein  45.08 
 
 
333 aa  213  4.9999999999999996e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  0.499323  n/a   
 
 
-
 
NC_013093  Amir_2567  putative acyl-CoA dehydrogenase-related protein  44.44 
 
 
359 aa  198  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752192  n/a   
 
 
-
 
NC_013521  Sked_20110  hypothetical protein  38.39 
 
 
382 aa  175  9.999999999999999e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.252423  normal  0.481515 
 
 
-
 
NC_008541  Arth_0335  hypothetical protein  38.78 
 
 
341 aa  173  3.9999999999999995e-42  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0512  hypothetical protein  40.13 
 
 
338 aa  163  4.0000000000000004e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0189199  decreased coverage  0.000000311595 
 
 
-
 
NC_009338  Mflv_0021  dehydrogenase  43.62 
 
 
313 aa  149  7e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0755375  normal 
 
 
-
 
NC_011886  Achl_0555  hypothetical protein  36.27 
 
 
350 aa  144  2e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012803  Mlut_01080  hypothetical protein  38.03 
 
 
372 aa  129  9.000000000000001e-29  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3272  putative acyl-CoA dehydrogenase-related protein  38.96 
 
 
396 aa  128  2.0000000000000002e-28  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00000123433  hitchhiker  0.0000576183 
 
 
-
 
NC_010725  Mpop_0138  cyclic nucleotide-binding protein  33.87 
 
 
382 aa  97.8  3e-19  Methylobacterium populi BJ001  Bacteria  normal  0.363055  normal  0.0562136 
 
 
-
 
NC_011666  Msil_3593  acyl-CoA dehydrogenase domain protein  31.96 
 
 
385 aa  89.4  9e-17  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_3329  acyl-CoA dehydrogenase type 2  31.67 
 
 
382 aa  87.8  3e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.684525  normal 
 
 
-
 
NC_010725  Mpop_4305  Acyl-CoA dehydrogenase type 2 domain  31.56 
 
 
412 aa  85.1  0.000000000000002  Methylobacterium populi BJ001  Bacteria  normal  0.0499711  normal 
 
 
-
 
NC_010172  Mext_3848  acyl-CoA dehydrogenase type 2  29.86 
 
 
391 aa  80.1  0.00000000000006  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.680066 
 
 
-
 
NC_011757  Mchl_4157  Acyl-CoA dehydrogenase type 2 domain  29.51 
 
 
391 aa  76.6  0.0000000000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0737881  normal 
 
 
-
 
NC_007958  RPD_0575  Acyl-CoA dehydrogenase  27.05 
 
 
322 aa  72  0.00000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4098  acyl-CoA dehydrogenase  28.62 
 
 
373 aa  69.3  0.0000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.461592  normal  0.148654 
 
 
-
 
NC_011365  Gdia_0796  Acyl-CoA dehydrogenase-like protein  28.27 
 
 
381 aa  69.3  0.0000000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.585612  normal  0.628725 
 
 
-
 
NC_013730  Slin_2922  Acyl-CoA dehydrogenase type 2 domain protein  26.43 
 
 
391 aa  65.5  0.000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1346  hypothetical protein  25.42 
 
 
364 aa  52  0.00002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0806475  n/a   
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  26.61 
 
 
398 aa  46.6  0.0007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1170  acyl-CoA dehydrogenase domain-containing protein  27.35 
 
 
381 aa  46.6  0.0008  Methylobacterium extorquens PA1  Bacteria  normal  0.665446  normal  0.0188326 
 
 
-
 
NC_010322  PputGB1_3342  acyl-CoA dehydrogenase type 2  28.3 
 
 
410 aa  46.2  0.001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2083  monoxygenase  38.83 
 
 
423 aa  45.1  0.002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1330  acyl-CoA dehydrogenase domain protein  26.91 
 
 
381 aa  45.4  0.002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.135454  normal  0.523473 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  31.31 
 
 
382 aa  45.1  0.003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_012560  Avin_31490  Acyl-CoA dehydrogenase family protein  28.21 
 
 
402 aa  44.3  0.004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3948  Acyl-CoA dehydrogenase-like  32.11 
 
 
385 aa  43.9  0.004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.54725  normal 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  26.48 
 
 
406 aa  43.5  0.006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  23.81 
 
 
381 aa  42.7  0.01  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
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