36 homologs were found in PanDaTox collection
for query gene Bphyt_1987 on replicon NC_010681
Organism: Burkholderia phytofirmans PsJN



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010681  Bphyt_1987  putative methyl-accepting chemotaxis sensory transducer  100 
 
 		 224 aa  447  1e-125  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.468867 
 
 
-
 
NC_007951  Bxe_A2210  methyl-accepting chemotaxis sensory transducer  93.3 
 
 		 224 aa  418  1e-116  Burkholderia xenovorans LB400  Bacteria  normal  0.994833  normal  0.0152385 
 
 
-
 
NC_008825  Mpe_A3300  methyl-accepting chemotaxis protein  44.09 
 
 		 233 aa  159  3e-38  Methylibium petroleiphilum PM1  Bacteria  normal  0.112186  normal  0.282642 
 
 
-
 
NC_007947  Mfla_0323  putative methyl-accepting chemotaxis sensory transducer  43.41 
 
 		 264 aa  155  5.0000000000000005e-37  Methylobacillus flagellatus KT  Bacteria  normal  0.759604  normal  1 
 
 
-
 
NC_010682  Rpic_0857  methyl-accepting chemotaxis protein  39.25 
 
 		 243 aa  151  5.9999999999999996e-36  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.224867 
 
 
-
 
NC_012856  Rpic12D_0922  methyl-accepting chemotaxis protein  39.15 
 
 		 243 aa  149  3e-35  Ralstonia pickettii 12D  Bacteria  normal  0.6251  normal  0.72873 
 
 
-
 
NC_010524  Lcho_1162  methyl-accepting chemotaxis sensory transducer  40.18 
 
 		 237 aa  139  3e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010622  Bphy_2338  methyl-accepting chemotaxis sensory transducer  36.82 
 
 		 266 aa  137  8.999999999999999e-32  Burkholderia phymatum STM815  Bacteria  normal  0.0329077  normal  0.0287817 
 
 
-
 
NC_007643  Rru_A2058  histidine kinase  34.29 
 
 		 499 aa  47  0.0003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21850  methyl-accepting chemotaxis sensory transducer  35.71 
 
 		 484 aa  46.2  0.0004  Halothermothrix orenii H 168  Bacteria  normal  0.925753  n/a   
 
 
-
 
NC_009975  MmarC6_0389  methyl-accepting chemotaxis sensory transducer  23.84 
 
 		 729 aa  45.4  0.0007  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  29.2 
 
 		 544 aa  44.7  0.001  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012029  Hlac_1029  methyl-accepting chemotaxis sensory transducer  26.83 
 
 		 819 aa  44.7  0.001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  normal  0.558162 
 
 
-
 
NC_009616  Tmel_0346  methyl-accepting chemotaxis sensory transducer  22.97 
 
 		 560 aa  45.1  0.001  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.00236335  n/a   
 
 
-
 
NC_007912  Sde_3631  putative methyl-accepting chemotaxis sensory transducer  33.33 
 
 		 731 aa  43.9  0.002  Saccharophagus degradans 2-40  Bacteria  normal  0.455048  normal  1 
 
 
-
 
NC_007484  Noc_0128  chemotaxis sensory transducer  31.68 
 
 		 537 aa  43.5  0.002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  29.08 
 
 		 557 aa  44.3  0.002  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  32.95 
 
 		 538 aa  44.3  0.002  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  33.33 
 
 		 522 aa  43.5  0.003  Shewanella baltica OS195  Bacteria  normal  1  normal  0.0176898 
 
 
-
 
NC_004578  PSPTO_5031  type IV pilus biogenesis protein PilJ  34.38 
 
 		 680 aa  43.5  0.003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  33.33 
 
 		 522 aa  43.1  0.003  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_009637  MmarC7_1764  methyl-accepting chemotaxis sensory transducer  28.57 
 
 		 729 aa  43.1  0.003  Methanococcus maripaludis C7  Archaea  normal  1  normal  0.0298102 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  33.33 
 
 		 522 aa  43.1  0.003  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_007005  Psyr_0491  chemotaxis sensory transducer  34.38 
 
 		 680 aa  43.5  0.003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.33 
 
 		 522 aa  42.7  0.004  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.33 
 
 		 522 aa  42.7  0.004  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.33 
 
 		 522 aa  42.7  0.004  Shewanella baltica OS223  Bacteria  normal  1  hitchhiker  0.000000000166485 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.33 
 
 		 522 aa  42.7  0.004  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal  1 
 
 
-
 
NC_007404  Tbd_2732  hypothetical protein  32.86 
 
 		 303 aa  42.7  0.004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  33.33 
 
 		 522 aa  43.1  0.004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011769  DvMF_3060  methyl-accepting chemotaxis sensory transducer  30.69 
 
 		 659 aa  42.7  0.005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.471114 
 
 
-
 
NC_013421  Pecwa_2018  methyl-accepting chemotaxis sensory transducer  32.2 
 
 		 650 aa  42.4  0.005  Pectobacterium wasabiae WPP163  Bacteria  normal  0.894021  n/a   
 
 
-
 
NC_009483  Gura_2692  methyl-accepting chemotaxis sensory transducer  30.28 
 
 		 768 aa  42.4  0.006  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1766  methyl-accepting chemotaxis sensory transducer  28.45 
 
 		 536 aa  42  0.008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_20550  methyl-accepting chemotaxis protein  28.89 
 
 		 733 aa  42  0.008  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.375054  normal  0.44591 
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  26.12 
 
 		 523 aa  41.6  0.01  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>