More than 300 homologs were found in PanDaTox collection
for query gene Bamb_3681 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010515  Bcenmc03_3260  acyl-CoA dehydrogenase domain-containing protein  83.15 
 
 
459 aa  685    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1754  Acyl-CoA dehydrogenase  86.9 
 
 
454 aa  671    Burkholderia sp. 383  Bacteria  normal  normal  0.0688656 
 
 
-
 
NC_010086  Bmul_4333  acyl-CoA dehydrogenase type 2  86.85 
 
 
440 aa  679    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.619225  normal  0.220534 
 
 
-
 
NC_010552  BamMC406_4154  acyl-CoA dehydrogenase domain-containing protein  96.15 
 
 
440 aa  805    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.233252 
 
 
-
 
NC_008061  Bcen_4109  Acyl-CoA dehydrogenase, type 2-like  85.29 
 
 
452 aa  664    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.381793  n/a   
 
 
-
 
NC_008391  Bamb_3681  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
442 aa  864    Burkholderia ambifaria AMMD  Bacteria  normal  0.902105  normal 
 
 
-
 
NC_008543  Bcen2424_4257  acyl-CoA dehydrogenase type 2  85.29 
 
 
452 aa  664    Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00125865  normal  0.295507 
 
 
-
 
NC_007348  Reut_B5046  Acyl-CoA dehydrogenase, C-terminal  68.17 
 
 
402 aa  508  1e-143  Ralstonia eutropha JMP134  Bacteria  normal  0.721222  n/a   
 
 
-
 
NC_007973  Rmet_2217  Acyl-CoA dehydrogenase  67.67 
 
 
402 aa  509  1e-143  Cupriavidus metallidurans CH34  Bacteria  normal  0.0777616  normal  0.101595 
 
 
-
 
NC_010678  Rpic_4462  Acyl-CoA dehydrogenase type 2 domain  64.99 
 
 
402 aa  503  1e-141  Ralstonia pickettii 12J  Bacteria  normal  normal  0.542965 
 
 
-
 
NC_012857  Rpic12D_4596  Acyl-CoA dehydrogenase type 2 domain protein  64.99 
 
 
402 aa  503  1e-141  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3873  Acyl-CoA dehydrogenase type 2 domain protein  66.32 
 
 
411 aa  468  9.999999999999999e-131  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0523  acyl-CoA dehydrogenase type 2  54.29 
 
 
407 aa  397  1e-109  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_31100  Acyl-CoA dehydrogenase family protein  52.05 
 
 
396 aa  372  1e-102  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  52.22 
 
 
388 aa  364  1e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2670  Acyl-CoA dehydrogenase type 2 domain protein  52.46 
 
 
389 aa  362  6e-99  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_3307  putative acyl-CoA dehydrogenase  52.93 
 
 
394 aa  362  1e-98  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4897  acyl-CoA dehydrogenase domain protein  53.67 
 
 
381 aa  360  4e-98  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  50.79 
 
 
384 aa  359  4e-98  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.39 
 
 
393 aa  359  6e-98  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  52.03 
 
 
384 aa  356  5e-97  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  50.38 
 
 
378 aa  352  5e-96  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_012560  Avin_21570  Acyl-CoA dehydrogenase family protein  50.36 
 
 
400 aa  350  3e-95  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  51.03 
 
 
390 aa  348  9e-95  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  51.87 
 
 
380 aa  348  1e-94  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_011757  Mchl_1330  acyl-CoA dehydrogenase domain protein  52.48 
 
 
381 aa  346  6e-94  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.135454  normal  0.523473 
 
 
-
 
NC_010172  Mext_1170  acyl-CoA dehydrogenase domain-containing protein  51.96 
 
 
381 aa  345  1e-93  Methylobacterium extorquens PA1  Bacteria  normal  0.665446  normal  0.0188326 
 
 
-
 
NC_004578  PSPTO_1790  acyl-CoA dehydrogenase family protein  48.33 
 
 
397 aa  341  2e-92  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_30500  putative acyl-CoA dehydrogenase  53.91 
 
 
383 aa  336  3.9999999999999995e-91  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5139  putative acyl-CoA dehydrogenase  46.42 
 
 
399 aa  322  6e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0630041 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  48.83 
 
 
406 aa  315  9.999999999999999e-85  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_010505  Mrad2831_4840  acyl-CoA dehydrogenase type 2  55.08 
 
 
381 aa  313  2.9999999999999996e-84  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.910203 
 
 
-
 
NC_009621  Smed_5653  acyl-CoA dehydrogenase type 2  45.29 
 
 
410 aa  310  2.9999999999999997e-83  Sinorhizobium medicae WSM419  Bacteria  normal  0.329683  normal  0.865966 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  40.68 
 
 
382 aa  274  2.0000000000000002e-72  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_009485  BBta_2584  putative acyl-CoA dehydrogenase  41.95 
 
 
398 aa  269  5.9999999999999995e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0375347 
 
 
-
 
NC_009921  Franean1_2020  acyl-CoA dehydrogenase type 2  37.38 
 
 
394 aa  244  3e-63  Frankia sp. EAN1pec  Bacteria  normal  0.692035  normal  0.294025 
 
 
-
 
NC_011981  Avi_7179  acyl-CoA dehydrogenase  36.43 
 
 
394 aa  240  4e-62  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3756  acyl-CoA dehydrogenase type 2  38.4 
 
 
418 aa  238  1e-61  Frankia sp. EAN1pec  Bacteria  normal  0.326681  normal 
 
 
-
 
NC_013093  Amir_4313  acyl-CoA dehydrogenase type 2 domain protein  40.31 
 
 
397 aa  231  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  37.63 
 
 
393 aa  213  4.9999999999999996e-54  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  33.93 
 
 
390 aa  207  3e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  35.29 
 
 
398 aa  196  6e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2419  Acyl-CoA dehydrogenase  38.59 
 
 
332 aa  196  9e-49  Frankia sp. CcI3  Bacteria  normal  0.238624  normal  0.291589 
 
 
-
 
NC_009523  RoseRS_0478  acyl-CoA dehydrogenase domain-containing protein  36.22 
 
 
396 aa  192  8e-48  Roseiflexus sp. RS-1  Bacteria  normal  0.859047  normal 
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  35.09 
 
 
394 aa  189  7e-47  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  28.39 
 
 
381 aa  157  2e-37  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  26.74 
 
 
382 aa  154  4e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_011658  BCAH187_A3128  putative acyl-CoA dehydrogenase, short-chain specific  27.42 
 
 
382 aa  154  4e-36  Bacillus cereus AH187  Bacteria  hitchhiker  0.000407188  n/a   
 
 
-
 
NC_011772  BCG9842_B2142  putative acyl-CoA dehydrogenase, short-chain specific  27.04 
 
 
382 aa  154  4e-36  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK2818  acyl-CoA dehydrogenase, short-chain specific  27.42 
 
 
382 aa  152  1e-35  Bacillus cereus E33L  Bacteria  normal  0.149479  n/a   
 
 
-
 
NC_009632  SaurJH1_2352  acyl-CoA dehydrogenase type 2  28.57 
 
 
384 aa  152  1e-35  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.657423  n/a   
 
 
-
 
NC_009487  SaurJH9_2310  acyl-CoA dehydrogenase type 2  28.57 
 
 
384 aa  152  1e-35  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.154104  n/a   
 
 
-
 
NC_005945  BAS2889  acyl-CoA dehydrogenase, short-chain specific  27.42 
 
 
382 aa  151  2e-35  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00742766  n/a   
 
 
-
 
NC_007530  GBAA_3105  acyl-CoA dehydrogenase, short-chain specific  27.42 
 
 
382 aa  151  2e-35  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.362062  n/a   
 
 
-
 
NC_011725  BCB4264_A3094  putative acyl-CoA dehydrogenase, short-chain specific  26.6 
 
 
382 aa  151  2e-35  Bacillus cereus B4264  Bacteria  normal  0.952201  n/a   
 
 
-
 
NC_011773  BCAH820_3109  putative acyl-CoA dehydrogenase, short-chain specific  27.42 
 
 
382 aa  151  3e-35  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_3126  acyl-CoA dehydrogenase, short-chain specific, putative  28.08 
 
 
382 aa  150  5e-35  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00757934  n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  31.73 
 
 
392 aa  149  7e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005957  BT9727_2857  acyl-CoA dehydrogenase, short-chain specific  27.15 
 
 
382 aa  149  7e-35  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.25076  n/a   
 
 
-
 
NC_009674  Bcer98_2066  acyl-CoA dehydrogenase type 2  27.2 
 
 
384 aa  147  4.0000000000000006e-34  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.335702  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  30.22 
 
 
387 aa  137  3.0000000000000003e-31  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1231  Acyl-CoA dehydrogenase, type 2-like protein  34.17 
 
 
384 aa  126  9e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.279686  normal 
 
 
-
 
NC_009972  Haur_2304  acyl-CoA dehydrogenase type 2  30.32 
 
 
392 aa  113  6e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0799931  n/a   
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  31.71 
 
 
387 aa  110  3e-23  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  31.35 
 
 
387 aa  105  2e-21  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  29.01 
 
 
389 aa  104  4e-21  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  27.84 
 
 
382 aa  100  7e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  27.58 
 
 
386 aa  99.4  1e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_013739  Cwoe_2677  Acyl-CoA dehydrogenase type 2 domain protein  29.25 
 
 
433 aa  99.4  1e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.3001  normal  0.883174 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  25.77 
 
 
377 aa  97.1  5e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
385 aa  95.9  1e-18  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2662  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
385 aa  96.3  1e-18  Shewanella sp. MR-7  Bacteria  normal  0.553599  normal 
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  25.52 
 
 
385 aa  94.4  3e-18  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4395  acyl-CoA dehydrogenase type 2  29.59 
 
 
434 aa  94.4  4e-18  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2595  acyl-CoA dehydrogenase domain-containing protein  24.73 
 
 
385 aa  94  5e-18  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.000133331 
 
 
-
 
NC_009380  Strop_0934  acyl-CoA dehydrogenase domain-containing protein  27.01 
 
 
387 aa  94  5e-18  Salinispora tropica CNB-440  Bacteria  normal  normal  0.496704 
 
 
-
 
NC_011146  Gbem_2826  acyl-CoA dehydrogenase domain protein  27.12 
 
 
385 aa  94  5e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13303  acyl-CoA dehydrogenase fadE25  25.94 
 
 
389 aa  93.2  7e-18  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1491  acyl-CoA dehydrogenase domain-containing protein  24.74 
 
 
385 aa  93.6  7e-18  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1527  acyl-CoA dehydrogenase domain-containing protein  24.74 
 
 
385 aa  93.6  7e-18  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1679  acyl-CoA dehydrogenase family protein  25.26 
 
 
385 aa  92.4  1e-17  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_4118  Acyl-CoA dehydrogenase  25.07 
 
 
580 aa  92.8  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.846783  n/a   
 
 
-
 
NC_008025  Dgeo_0812  acyl-CoA dehydrogenase-like protein  26.32 
 
 
393 aa  92.4  1e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1497  acyl-CoA dehydrogenase domain-containing protein  24.74 
 
 
385 aa  92  2e-17  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1490  butyryl-CoA dehydrogenase  24.4 
 
 
378 aa  92  2e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  23.97 
 
 
381 aa  92  2e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_011663  Sbal223_2854  acyl-CoA dehydrogenase domain protein  24.74 
 
 
385 aa  92  2e-17  Shewanella baltica OS223  Bacteria  normal  0.715109  hitchhiker  0.0000000460252 
 
 
-
 
NC_014150  Bmur_2643  acyl-CoA dehydrogenase domain protein  23.33 
 
 
371 aa  91.3  3e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  0.475979  n/a   
 
 
-
 
NC_009656  PSPA7_2935  hypothetical protein  26.58 
 
 
419 aa  90.9  4e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2769  acyl-CoA dehydrogenase domain-containing protein  24.46 
 
 
385 aa  90.9  4e-17  Shewanella sp. ANA-3  Bacteria  normal  normal  0.329604 
 
 
-
 
NC_009675  Anae109_4277  acyl-CoA dehydrogenase domain-containing protein  24.69 
 
 
579 aa  90.9  4e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.943677  normal 
 
 
-
 
NC_008345  Sfri_1340  butyryl-CoA dehydrogenase  24.55 
 
 
385 aa  90.5  5e-17  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.92296  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  24.93 
 
 
382 aa  90.5  5e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  24.82 
 
 
389 aa  90.1  7e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1475  butyryl-CoA dehydrogenase  24.62 
 
 
385 aa  89.7  9e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.00937307 
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  24.45 
 
 
387 aa  89.7  9e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  26.18 
 
 
377 aa  89.4  1e-16  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  26.7 
 
 
384 aa  89  1e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1669  butyryl-CoA dehydrogenase  24.1 
 
 
385 aa  88.6  2e-16  Shewanella loihica PV-4  Bacteria  normal  0.260436  hitchhiker  0.00156032 
 
 
-
 
NC_009077  Mjls_3501  acyl-CoA dehydrogenase type 2  27.93 
 
 
411 aa  88.6  2e-16  Mycobacterium sp. JLS  Bacteria  normal  0.102842  normal  0.83486 
 
 
-
 
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