More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_4154 on replicon NC_010552
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010086  Bmul_4333  acyl-CoA dehydrogenase type 2  83.75 
 
 
440 aa  677    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.619225  normal  0.220534 
 
 
-
 
NC_010552  BamMC406_4154  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
440 aa  859    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.233252 
 
 
-
 
NC_007511  Bcep18194_B1754  Acyl-CoA dehydrogenase  88.06 
 
 
454 aa  666    Burkholderia sp. 383  Bacteria  normal  normal  0.0688656 
 
 
-
 
NC_010515  Bcenmc03_3260  acyl-CoA dehydrogenase domain-containing protein  83.12 
 
 
459 aa  681    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4109  Acyl-CoA dehydrogenase, type 2-like  85.49 
 
 
452 aa  662    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.381793  n/a   
 
 
-
 
NC_008391  Bamb_3681  acyl-CoA dehydrogenase domain-containing protein  96.7 
 
 
442 aa  798    Burkholderia ambifaria AMMD  Bacteria  normal  0.902105  normal 
 
 
-
 
NC_008543  Bcen2424_4257  acyl-CoA dehydrogenase type 2  85.49 
 
 
452 aa  662    Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00125865  normal  0.295507 
 
 
-
 
NC_007973  Rmet_2217  Acyl-CoA dehydrogenase  67.42 
 
 
402 aa  509  1e-143  Cupriavidus metallidurans CH34  Bacteria  normal  0.0777616  normal  0.101595 
 
 
-
 
NC_010678  Rpic_4462  Acyl-CoA dehydrogenase type 2 domain  64.99 
 
 
402 aa  508  1e-143  Ralstonia pickettii 12J  Bacteria  normal  normal  0.542965 
 
 
-
 
NC_012857  Rpic12D_4596  Acyl-CoA dehydrogenase type 2 domain protein  64.99 
 
 
402 aa  508  1e-143  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5046  Acyl-CoA dehydrogenase, C-terminal  67.92 
 
 
402 aa  504  1e-141  Ralstonia eutropha JMP134  Bacteria  normal  0.721222  n/a   
 
 
-
 
NC_012791  Vapar_3873  Acyl-CoA dehydrogenase type 2 domain protein  66.84 
 
 
411 aa  473  1e-132  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0523  acyl-CoA dehydrogenase type 2  53.54 
 
 
407 aa  395  1e-109  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_31100  Acyl-CoA dehydrogenase family protein  54.1 
 
 
396 aa  379  1e-104  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.75 
 
 
393 aa  365  1e-100  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_011666  Msil_2670  Acyl-CoA dehydrogenase type 2 domain protein  50.76 
 
 
389 aa  363  2e-99  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  51.96 
 
 
388 aa  364  2e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3307  putative acyl-CoA dehydrogenase  52.67 
 
 
394 aa  361  1e-98  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  52.3 
 
 
384 aa  358  8e-98  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_010725  Mpop_4897  acyl-CoA dehydrogenase domain protein  52.91 
 
 
381 aa  358  9.999999999999999e-98  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  50.51 
 
 
378 aa  357  1.9999999999999998e-97  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  50 
 
 
384 aa  355  6.999999999999999e-97  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_21570  Acyl-CoA dehydrogenase family protein  51.65 
 
 
400 aa  353  2.9999999999999997e-96  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  52.97 
 
 
380 aa  353  4e-96  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_011757  Mchl_1330  acyl-CoA dehydrogenase domain protein  53 
 
 
381 aa  350  2e-95  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.135454  normal  0.523473 
 
 
-
 
NC_010172  Mext_1170  acyl-CoA dehydrogenase domain-containing protein  52.48 
 
 
381 aa  350  3e-95  Methylobacterium extorquens PA1  Bacteria  normal  0.665446  normal  0.0188326 
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  51.03 
 
 
390 aa  349  4e-95  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_004578  PSPTO_1790  acyl-CoA dehydrogenase family protein  47.45 
 
 
397 aa  345  1e-93  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_30500  putative acyl-CoA dehydrogenase  53.65 
 
 
383 aa  337  1.9999999999999998e-91  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5139  putative acyl-CoA dehydrogenase  46.88 
 
 
399 aa  322  6e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0630041 
 
 
-
 
NC_010505  Mrad2831_4840  acyl-CoA dehydrogenase type 2  54.8 
 
 
381 aa  317  2e-85  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.910203 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  49.2 
 
 
406 aa  313  5.999999999999999e-84  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_009621  Smed_5653  acyl-CoA dehydrogenase type 2  44.5 
 
 
410 aa  311  2e-83  Sinorhizobium medicae WSM419  Bacteria  normal  0.329683  normal  0.865966 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  40.16 
 
 
382 aa  276  4e-73  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_009485  BBta_2584  putative acyl-CoA dehydrogenase  41.69 
 
 
398 aa  271  2e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0375347 
 
 
-
 
NC_009921  Franean1_2020  acyl-CoA dehydrogenase type 2  37.86 
 
 
394 aa  249  9e-65  Frankia sp. EAN1pec  Bacteria  normal  0.692035  normal  0.294025 
 
 
-
 
NC_011981  Avi_7179  acyl-CoA dehydrogenase  36.88 
 
 
394 aa  243  7e-63  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3756  acyl-CoA dehydrogenase type 2  38.8 
 
 
418 aa  237  3e-61  Frankia sp. EAN1pec  Bacteria  normal  0.326681  normal 
 
 
-
 
NC_013093  Amir_4313  acyl-CoA dehydrogenase type 2 domain protein  40.57 
 
 
397 aa  232  1e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  37.88 
 
 
393 aa  216  5e-55  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  33.16 
 
 
390 aa  203  5e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007777  Francci3_2419  Acyl-CoA dehydrogenase  38.91 
 
 
332 aa  200  5e-50  Frankia sp. CcI3  Bacteria  normal  0.238624  normal  0.291589 
 
 
-
 
NC_009523  RoseRS_0478  acyl-CoA dehydrogenase domain-containing protein  36.06 
 
 
396 aa  194  2e-48  Roseiflexus sp. RS-1  Bacteria  normal  0.859047  normal 
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  35.04 
 
 
398 aa  194  2e-48  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  34.84 
 
 
394 aa  188  1e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  27.98 
 
 
382 aa  159  7e-38  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  28.39 
 
 
381 aa  155  1e-36  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2142  putative acyl-CoA dehydrogenase, short-chain specific  27.76 
 
 
382 aa  155  1e-36  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK2818  acyl-CoA dehydrogenase, short-chain specific  28.16 
 
 
382 aa  154  2e-36  Bacillus cereus E33L  Bacteria  normal  0.149479  n/a   
 
 
-
 
NC_011658  BCAH187_A3128  putative acyl-CoA dehydrogenase, short-chain specific  28.16 
 
 
382 aa  155  2e-36  Bacillus cereus AH187  Bacteria  hitchhiker  0.000407188  n/a   
 
 
-
 
NC_009487  SaurJH9_2310  acyl-CoA dehydrogenase type 2  28.61 
 
 
384 aa  154  4e-36  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.154104  n/a   
 
 
-
 
NC_009632  SaurJH1_2352  acyl-CoA dehydrogenase type 2  28.61 
 
 
384 aa  154  4e-36  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.657423  n/a   
 
 
-
 
NC_011725  BCB4264_A3094  putative acyl-CoA dehydrogenase, short-chain specific  27.32 
 
 
382 aa  153  5e-36  Bacillus cereus B4264  Bacteria  normal  0.952201  n/a   
 
 
-
 
NC_011773  BCAH820_3109  putative acyl-CoA dehydrogenase, short-chain specific  28.16 
 
 
382 aa  153  5e-36  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS2889  acyl-CoA dehydrogenase, short-chain specific  28.16 
 
 
382 aa  153  5.9999999999999996e-36  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00742766  n/a   
 
 
-
 
NC_007530  GBAA_3105  acyl-CoA dehydrogenase, short-chain specific  28.16 
 
 
382 aa  153  5.9999999999999996e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.362062  n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  32.01 
 
 
392 aa  152  8.999999999999999e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_3126  acyl-CoA dehydrogenase, short-chain specific, putative  28.31 
 
 
382 aa  152  1e-35  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00757934  n/a   
 
 
-
 
NC_005957  BT9727_2857  acyl-CoA dehydrogenase, short-chain specific  27.89 
 
 
382 aa  150  3e-35  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.25076  n/a   
 
 
-
 
NC_009674  Bcer98_2066  acyl-CoA dehydrogenase type 2  26.74 
 
 
384 aa  146  8.000000000000001e-34  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.335702  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  29.83 
 
 
387 aa  140  3.9999999999999997e-32  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1231  Acyl-CoA dehydrogenase, type 2-like protein  34.45 
 
 
384 aa  129  1.0000000000000001e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.279686  normal 
 
 
-
 
NC_009972  Haur_2304  acyl-CoA dehydrogenase type 2  29.87 
 
 
392 aa  110  4.0000000000000004e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0799931  n/a   
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  31.53 
 
 
387 aa  107  6e-22  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_009380  Strop_0934  acyl-CoA dehydrogenase domain-containing protein  27.79 
 
 
387 aa  103  5e-21  Salinispora tropica CNB-440  Bacteria  normal  normal  0.496704 
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  28.97 
 
 
389 aa  102  1e-20  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  27.18 
 
 
386 aa  100  4e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  31.35 
 
 
387 aa  100  5e-20  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  25.26 
 
 
385 aa  99  1e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2662  acyl-CoA dehydrogenase domain-containing protein  25.52 
 
 
385 aa  99.4  1e-19  Shewanella sp. MR-7  Bacteria  normal  0.553599  normal 
 
 
-
 
NC_009953  Sare_0876  acyl-CoA dehydrogenase domain-containing protein  27.15 
 
 
387 aa  99  1e-19  Salinispora arenicola CNS-205  Bacteria  normal  0.189497  normal  0.119821 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  25.49 
 
 
377 aa  98.6  2e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_011146  Gbem_2826  acyl-CoA dehydrogenase domain protein  26.3 
 
 
385 aa  98.6  2e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2677  Acyl-CoA dehydrogenase type 2 domain protein  28.57 
 
 
433 aa  98.2  3e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.3001  normal  0.883174 
 
 
-
 
NC_008321  Shewmr4_2595  acyl-CoA dehydrogenase domain-containing protein  25.26 
 
 
385 aa  97.1  5e-19  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.000133331 
 
 
-
 
NC_009997  Sbal195_1527  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
385 aa  96.3  9e-19  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1491  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
385 aa  96.3  9e-19  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  25.85 
 
 
387 aa  96.3  9e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_011663  Sbal223_2854  acyl-CoA dehydrogenase domain protein  25 
 
 
385 aa  95.1  2e-18  Shewanella baltica OS223  Bacteria  normal  0.715109  hitchhiker  0.0000000460252 
 
 
-
 
NC_009052  Sbal_1497  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
385 aa  95.1  2e-18  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  26.44 
 
 
377 aa  94.7  3e-18  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  25.52 
 
 
385 aa  94.7  3e-18  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1679  acyl-CoA dehydrogenase family protein  24.55 
 
 
385 aa  94  5e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2769  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
385 aa  94  5e-18  Shewanella sp. ANA-3  Bacteria  normal  normal  0.329604 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  26.76 
 
 
382 aa  93.6  6e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  25.37 
 
 
389 aa  93.6  6e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2935  hypothetical protein  27.02 
 
 
419 aa  93.6  6e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13303  acyl-CoA dehydrogenase fadE25  25.19 
 
 
389 aa  93.6  7e-18  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1490  butyryl-CoA dehydrogenase  24.14 
 
 
378 aa  93.2  9e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1340  butyryl-CoA dehydrogenase  24.81 
 
 
385 aa  92.4  1e-17  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.92296  n/a   
 
 
-
 
NC_012918  GM21_1386  acyl-CoA dehydrogenase domain protein  26.27 
 
 
385 aa  92.8  1e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009092  Shew_1669  butyryl-CoA dehydrogenase  24.36 
 
 
385 aa  92  2e-17  Shewanella loihica PV-4  Bacteria  normal  0.260436  hitchhiker  0.00156032 
 
 
-
 
NC_008025  Dgeo_0812  acyl-CoA dehydrogenase-like protein  25.99 
 
 
393 aa  92  2e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1475  butyryl-CoA dehydrogenase  24.62 
 
 
385 aa  91.3  3e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.00937307 
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  23.69 
 
 
381 aa  91.7  3e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  24.73 
 
 
382 aa  91.3  3e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_014150  Bmur_2643  acyl-CoA dehydrogenase domain protein  23.33 
 
 
371 aa  91.3  4e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  0.475979  n/a   
 
 
-
 
NC_011831  Cagg_0202  acyl-CoA dehydrogenase domain protein  27.37 
 
 
382 aa  90.9  4e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221874  normal 
 
 
-
 
NC_009901  Spea_2781  acyl-CoA dehydrogenase domain-containing protein  24.36 
 
 
385 aa  90.5  5e-17  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  25.59 
 
 
375 aa  90.9  5e-17  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
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